Anoxybacillus gonensis: AFK25_10245
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Entry
AFK25_10245 CDS
T04000
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
agn
Anoxybacillus gonensis
Brite
KEGG Orthology (KO) [BR:
agn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agn03019
]
AFK25_10245
03009 Ribosome biogenesis [BR:
agn03009
]
AFK25_10245
Enzymes [BR:
agn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AFK25_10245
Messenger RNA biogenesis [BR:
agn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AFK25_10245
Ribosome biogenesis [BR:
agn03009
]
Prokaryotic type
rRNA helicases
AFK25_10245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKS38941
UniProt:
A0AAW7TEI7
LinkDB
All DBs
Position
complement(1941312..1942589)
Genome browser
AA seq
425 aa
AA seq
DB search
MFERFSFHPFIIEALHHLKFHKPTPIQERVIPAVLRGESVIGQSQTGTGKTHAYLLPIIE
RIDPHVDEVQAVITAPTRELATQIYHEVLKITKFCPNDHRITARCFVGGTDKLRSIEKLK
TQPHIVIGTPGRVYDLVREQALFVHTARMLVIDEADVMLDMGFLTDVDQVAGCMPEDLQM
LVFSATIPEKLKPFLKKYMEHPTHIHIAPKQVAASTIEHILIPLRHRDRLQLLHDILVSY
NPYLAIVFVNTRKTADEVANGLIEKGLKVGVLHGDLTPRERKKMMKAIRDLQFQYIVATD
LAARGIDIEGVSHVINYELPTDLDFYVHRTGRTGRAGYAGTATTIYEPSDQHALVKLEKK
GIHFLHRDFRHGEWIELDAWNGRKKEKKDEVEQLVEKIAKKQKKVKPGYKKKLREQLKKQ
RAKKK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgtttttcgtttcatccgtttattatagaggcgcttcatcatttaaagttt
cataaaccaacacctattcaagagcgtgtcattccggctgtcttgcgtggagagagcgtc
atcgggcaatcgcaaacgggaacaggaaagacgcatgcgtatttattgccgatcatcgaa
cgcattgatccacatgttgacgaagtacaagcggttattacagcaccgacgcgtgagtta
gctacgcaaatttatcatgaagtattaaaaataacgaaattttgtccaaacgatcatcgc
attacagcgcgctgttttgtcggcggaacagataaattacgatcgattgaaaagttgaaa
acacaacctcatatcgtcattggcacaccggggcgcgtgtatgatctcgttcgtgaacaa
gcgctatttgttcatacggctcggatgcttgtcattgatgaggcagatgttatgcttgat
atgggatttcttacagatgtcgaccaagtggcaggatgcatgccagaagacttgcaaatg
ctcgtcttttcagcaacgattccagaaaagttaaagccgtttttgaaaaaatatatggag
cacccgacacatatccatattgctccgaagcaagtagccgcatcaaccattgagcatatt
ttaatcccgcttcgccatcgcgatcgtttgcagcttttacacgatatattagttagttac
aacccatatttagccattgtttttgtaaacacgcgtaaaacagctgatgaagtggcaaac
ggtttaattgaaaaaggattaaaagtaggcgtgttacatggggatttaactccgcgcgag
cgaaaaaagatgatgaaagcaattcgtgatttacaattccaatacattgtcgcgacagat
ttagccgcgcgcggaatcgatattgaaggcgtcagccacgtcatcaattatgaactgcca
acggatttagatttttacgtacatcgtacaggtcgaacagggcgtgcaggttatgctggt
acggccacaacgatttacgaaccatctgatcaacatgcgttagtgaagttagagaaaaaa
ggaattcatttccttcatcgtgattttcgtcatggtgaatggattgagctcgatgcgtgg
aatggacggaaaaaagagaaaaaagatgaagttgagcaactcgttgaaaaaatagcgaaa
aaacaaaagaaagtcaaaccgggatataagaaaaaattacgagagcagttgaaaaaacaa
agagcgaaaaagaaataa
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