Ashbya gossypii (Eremothecium gossypii): AGOS_AAR180C
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Entry
AGOS_AAR180C CDS
T00167
Name
(RefSeq) AAR180Cp
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ago
Ashbya gossypii (Eremothecium gossypii)
Pathway
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_AAR180C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ago03041
]
AGOS_AAR180C
03009 Ribosome biogenesis [BR:
ago03009
]
AGOS_AAR180C
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGOS_AAR180C
Spliceosome [BR:
ago03041
]
Complex A
U2 snRNP components
U2 related factors
AGOS_AAR180C
Complex B
AGOS_AAR180C
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
AGOS_AAR180C
Ribosome biogenesis [BR:
ago03009
]
Eukaryotic type
90S particles
Helicases
AGOS_AAR180C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_23
ResIII
nSTAND3
AAA_7
AAA_30
ABC_tran
Motif
Other DBs
NCBI-GeneID:
4618759
NCBI-ProteinID:
NP_982723
UniProt:
Q75E97
LinkDB
All DBs
Position
I:complement(665685..667985)
Genome browser
AA seq
766 aa
AA seq
DB search
MAKRRLSSEGHADPVKTSVPEHAAEVAEELSATHRQTPVEPMVHHDAGEFTDMERHKTTA
SQARQLEDGENNPFTGKPFSENYVKILKVRRDLPVHAQRDEFLKMYQENQVMVFVGETGS
GKTTQIPQFVLFDEMPHLRNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN
KTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLIKQVVLRRPD
LKIIVMSATLDAEKFQRYFNNSPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHAT
EGEGDILLFLTGEEEIEDAVRKISLEGDQLIREQGCGPIKVYPLYGSLPPHHQQRIFEPA
PASHNGRPGRKVVVSTNIAETSLTIDGIVYVIDLGFSKQKVYNPRIRVESLLVSPISKAS
AQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF
DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSNEFHCSE
EILTIVAMLSVPNVFVRPSKDRKRADDAKSVFAHPDGDHITLLNVYHGFKSDEAYNYGIH
QWCRDNFLNYRSLAAADNIRSQLERLMKRYSLELNTTEYDDPRYFDNIRKALAAGFFMQV
AKKRSGGKGYITIKDNQDVLIHPSTVIGHDAEWVIYNEFVLTTQNYIRTITSVRPEWLIE
LAPAYYDLDNFQKGDIKLSLERIKQKMDRIEELSKEQSKKHRQSRA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaggagattgtcatccgaagggcatgcagaccctgtaaaaacgtctgttccc
gagcatgcagccgaagttgcggaggagctctcggctactcatcggcaaacgcccgtagag
cctatggtccaccatgacgctggagaattcacagacatggagcgtcacaagaccacagca
tcacaagcacgtcagctggaagatggagagaacaacccttttactgggaagccgttctcg
gagaattacgtgaagatcctaaaggtgcggcgggatctacctgtgcacgcccagcgggat
gagtttctaaagatgtaccaggaaaaccaagtgatggtgtttgtgggtgaaacaggttct
ggtaagacgacgcagatcccgcagtttgtgctgttcgacgagatgcctcacctgcgtaac
acgcaggttgcttgtacgcagccccgtcgtgtggccgcgatgtcggttgcgcagagagtt
gcggaggaaatggatgttaaactaggcgaagaggtgggttactcgattcgtttcgagaat
aagacatctaataagaccatattaaagtacatgaccgatggtatgcttttgagagaggcg
atggaagaccacgatctaaaacgctactcgtgtattatattggacgaagcccacgagcgg
acacttgccaccgatattcttatgggtctaataaagcaggttgttttgcggcggcctgat
ttgaaaatcattgtcatgtccgcaacgctggatgctgaaaagttccagagatacttcaat
aattcaccgctattagctgttccagggagaacccatcccgtcgaaatatattacactcca
gagtttcagcgtgattacttggactctgcgattcgtacagtcctacagattcacgctacc
gaaggtgagggtgatattcttctctttttgacaggtgaggaggaaatcgaggatgccgtg
cgaaagatctccttggagggtgaccaattaatccgcgagcaaggctgtggaccaattaag
gtatacccattgtacggttcgcttccaccacaccaccagcagcgcatttttgagcccgct
ccagcatcccacaatgggagaccaggcagaaaagtggttgtttcgactaatatcgcagaa
acctcgctgaccattgatggtatagtctacgtcattgacctggggttctccaaacagaaa
gtgtataacccgcggattagagtcgagtcccttctcgtttcgccaatttctaaagcgtcc
gcccaacagagagctggtcgtgccggtcgtacgaggccaggaaaatgtttcagactgtat
actgaagaggcatttaagaaggaattgatcgagcaatcctatcctgagattctccggtcg
aacttgtcctctactgttctggagttgaagaagctgggtattgacgacttggttcatttc
gactttatggatcctccagcacctgaaacaatgatgcgcgcactagaagagctaaattat
cttgcatgtctggacgatgaggggaacctaacccctttgggcaggctggcatctcagttt
ccgcttgatcccatgttggcggttatgctcataggatcgaatgaattccactgttccgaa
gaaattctgacaatcgtcgccatgttgtctgttcctaacgtcttcgtgcgcccatccaag
gatcggaaacgtgcagacgatgctaaaagtgtcttcgcacatccagacggggaccacatt
acccttttgaatgtctatcacggcttcaagtctgatgaggcgtacaattatggcatccat
cagtggtgcagagacaacttcttgaactaccgttccttagcagcagcggacaacattcgt
tctcagttggagaggctaatgaagcgctatagcctggaactaaacactacagagtacgat
gatcctcgctactttgacaacatcaggaaggcgcttgctgcaggctttttcatgcaggta
gcgaagaaacgctcgggagggaaaggctacattactatcaaagacaaccaagacgtgctc
atccaccctagcacggtcattggccacgatgcagagtgggtaatctacaatgaattcgtg
ctgactactcaaaactacatacggacgatcacctccgtccgtcctgagtggttgattgaa
ctcgcacctgcgtactatgaccttgataactttcaaaaaggtgatatcaagctcagtctg
gaacggattaaacaaaagatggatcgcatcgaagagctaagtaaagagcaatccaagaag
catagacagagccgcgcgtag
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integrated database retrieval system
