Eremothecium gossypii: AGOS_ABR022C
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Entry
AGOS_ABR022C CDS
T00167
Name
(RefSeq) ABR022Cp
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ago
Eremothecium gossypii
Pathway
ago03013
Nucleocytoplasmic transport
ago03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGOS_ABR022C
03015 mRNA surveillance pathway
AGOS_ABR022C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ago03019
]
AGOS_ABR022C
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AGOS_ABR022C
5.6.2.5 RNA 5'-3' helicase
AGOS_ABR022C
Messenger RNA biogenesis [BR:
ago03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AGOS_ABR022C
mRNA cycle factors
Common to processing body (P body) and stress granule
AGOS_ABR022C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
SLFN-g3_helicase
ResIII
PIF1
NPHP3_N
DEAD
NAT10_TcmA_helicase
nSTAND3
AAA_22
Flavi_DEAD
PhoH
ATPase
SRP54
AAA_16
Motif
Other DBs
NCBI-GeneID:
4619060
NCBI-ProteinID:
NP_982968
UniProt:
Q75DS7
LinkDB
All DBs
Position
II:complement(434620..437619)
Genome browser
AA seq
999 aa
AA seq
DB search
MAASLENGAKETTPAISNSGSQGLLAQDGGSDRELDFYYNSDGELIKLVADDEKPEEDLG
NLVSVAEHACSYCSIDSPSCVVKCNACNKWFCNSKNGTSSSHIINHLVFSHHNVVSLHPE
SDLGDTVLECYNCGCRNVFLLGFVSAKSEAVVVILCRLPCAQTRNVNWDTDQWQSLIENR
QLLSWVAEEPSEEDQLKACLITPSQISKLEMKWRSNKDATINDIDLPEEQEELPPVLMRY
TDAYQYQRSFGPLVKLEADYDKQLKESQALEHISVTWTLGLNNRHLASFALSTFESNELK
VAVGDEMILRYSGLQQAEWEGRGYILRLPNSFQDEFTLELKPSKAPPPTNLTTGFTAEFV
WKGTSYQRMQEALKKFAVDKKSISGYLYYKILGHDVPDIEFEVDLPKDFSIPNFTKLNTS
QVNAVAHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKMHKERVLVCAPSNVAVDHLAAKL
RDMGLKVVRLTAKSREDVESSVSDLALHNLVARSSRGELKKLLKLKDEVGELSVKDTRSF
VKLVRKTESTILKKADVVCCTCVGAGDKRLDSKFRTVLIDESTQASEPECLIPIIKGAKQ
VVLVGDHQQLGPVILDRNAGDAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMF
YEGTLQNGVTVEQRTVVDSSFPWPICDIPMMFWANYGREEISANGTSYLNRIEAINCERI
ITRLFKDGVKPEQIGVVTPYEGQRAYIIQYMQMNGSMDKDLYMTVEVASVDAFQGREKDY
IILSCVRANDQQSIGFLTDPRRLNVALTRAKYGLAILGNPASLCRNSIWNHLLIHFREKG
CLVEGTMDNLQLCTMQLTRSKNVNSNSDSRQKNTKWHLESNLPLPEFPISNNREFDSQNL
MSFGGQGSNIFAPSSDLSSFMNSNQQYWNAPGPELGLPAKERDSEQRGYTSSNVGLDATL
ARELQQFTASSLGYEANQDSTGTAQFKALNSFQNLNIHG
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagcttggaaaatggagccaaggagaccacgcctgccatttcgaacagtggg
agccagggcttgcttgcgcaggacggcggctcggacagggagctagacttctactacaac
tcggacggcgaactgataaagctggtagcagatgacgagaagccggaggaggacctcggg
aacctggtgtccgtcgcggagcacgcgtgctcgtactgctcgatagactcgcccagctgc
gtggtgaagtgcaacgcgtgcaacaagtggttctgcaactcgaagaacgggacgtccagc
tcacacatcatcaaccacttggtgttctcacaccacaacgtggtatcgctgcacccggag
tctgacctgggtgacactgtgcttgagtgctacaactgtggctgcagaaacgtgttcctg
ctggggtttgtgtcggccaagagcgaagccgttgtggtgatcctctgccgcttgccctgt
gcgcagacgagaaacgtgaactgggacaccgaccagtggcagtcgctgatagaaaacagg
cagctgctcagctgggtggccgaggagccgagcgaggaggaccagttgaaggcgtgcctg
atcaccccgagccagatctctaagctggagatgaagtggcgctcgaacaaggacgcgaca
atcaacgacatcgacctgcccgaggagcaggaggaactgccacctgttctgatgcggtac
accgatgcataccagtaccagagatcgttcggtcctttggtgaagttggaagcagactac
gacaagcagctgaaggagtcgcaggcactagagcatatttccgtgacctggacactgggg
ttgaataatcgtcatcttgcctcgtttgccctttcgacgtttgagtctaacgagctcaag
gtcgctgtaggcgatgagatgattttgagatattctggtctccaacaggcggaatgggag
gggcgcgggtatattctgcgcttgcccaacagtttccaggatgagttcactctggaactg
aagccaagcaaggcgccgcctccaacaaacctgacgactgggttcactgccgaattcgtt
tggaagggtacgtcctaccagcgtatgcaagaagcgctgaaaaagtttgctgtggacaag
aagtccatctcaggttacctatattacaagatactaggacacgatgtaccagatatcgag
ttcgaagtcgaccttccaaaagacttttctattccaaatttcacgaagctcaatacctct
caggttaacgctgtagcgcatgtgctacagagacctctatctctgattcaaggcccaccg
ggcactggtaaaaccgtgacatctgcgacgattgtataccatttgtcgaaaatgcacaaa
gagcgtgttttggtctgtgccccgtctaacgtcgctgtcgaccatctggccgcgaagctt
cgcgatatgggtctgaaggtcgttcgcctgactgcgaaaagcagagaggacgttgaatcg
tctgtttcagatttagctttgcataatttggttgctcgttcgtcaagaggcgagctcaag
aagttgttaaagcttaaggatgaagttggcgagctttctgtaaaggatacgaggtccttt
gtgaaactagtaagaaagacagagtctacaatcttaaagaaggccgatgtagtgtgctgc
acatgtgttggtgccggtgacaagcggctggattctaaatttagaacggtgctcattgat
gagagtactcaggcctctgaacccgaatgcttgatccccataattaagggtgcaaagcaa
gttgtgctggtaggcgaccaccagcaactgggaccagtgattttagaccgtaacgcaggt
gatgcaggcctcaagcagtcgctattcgaacgtttgatttctctgggtcatgtcccaatt
aggctggaggttcaatatcgtatgaatccatatttgagtgaatttccgagtaacatgttt
tatgaaggcactttgcagaatggagttactgtagagcagcgtactgttgtcgatagctct
ttcccatggcctatctgtgatataccaatgatgttctgggccaactatgggagggaggaa
atatcagccaatggtacctcctatctgaatcgtattgaagccatcaactgtgaacgtatc
ataactcggttattcaaagatggtgtaaagccagaacagataggtgttgtgacaccatac
gaaggtcagagagcatatatcattcagtacatgcaaatgaacggttctatggacaaggat
ctgtatatgactgtggaagttgcctctgtggacgcgttccagggtcgtgagaaggattac
atcattctgtcttgtgttcgtgcgaatgaccaacaatccattggatttttaactgaccct
agaaggttaaacgttgcactcacacgtgcaaaatatggtttagctatattaggtaaccca
gcctcactttgcagaaacagtatttggaatcatctgctaattcatttcagagagaagggc
tgtcttgttgaaggtacgatggataatctccaactgtgcaccatgcagttaaccaggtca
aagaatgtaaattccaattcagattctcgccagaagaataccaagtggcatttagagagc
aatctgccccttcctgaattcccaatttctaataatagagagtttgattctcagaattta
atgtctttcggtggccaaggatcaaacatattcgctccaagcagtgacctttcttctttt
atgaacagtaatcagcaatattggaatgcacctggtccagaacttggtctacctgcgaaa
gaacgtgattctgagcagagaggctatacatcatcaaacgtaggattggacgccacgtta
gcccgagagctgcaacaatttacggccagttcacttggttatgaggctaatcaagatagt
accggcacagctcaattcaaggctttgaattcttttcaaaatctgaatatccatgggtaa
DBGET
integrated database retrieval system
