KEGG   Eremothecium gossypii: AGOS_ACL125C
Entry
AGOS_ACL125C      CDS       T00167                                 
Name
(RefSeq) ACL125Cp
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ago  Eremothecium gossypii
Pathway
ago03018  RNA degradation
ago03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ago00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGOS_ACL125C
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGOS_ACL125C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ago03019]
    AGOS_ACL125C
   03041 Spliceosome [BR:ago03041]
    AGOS_ACL125C
Messenger RNA biogenesis [BR:ago03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AGOS_ACL125C
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     AGOS_ACL125C
Spliceosome [BR:ago03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    AGOS_ACL125C
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 4619399
NCBI-ProteinID: NP_983279
UniProt: Q75CP4
LinkDB
Position
III:complement(128645..128965)
AA seq 106 aa
MSPLLKEYLGRRVVVVTTDGGCLVATLEGFDKTANLLLSDVRQRATGEGLAAAFLLQGSQ
IVCCGPLEGGGPEQEPQAAALRDTRNVVAREHDIWARAWQARQARE
NT seq 321 nt   +upstreamnt  +downstreamnt
atgtcaccgttgttgaaggagtatctaggccgccgggtcgtggtggttaccacggacggg
ggctgtctggtggccacgctggagggcttcgacaagaccgccaacctcctgctgtcggac
gtcagacagcgcgccaccggcgagggcctggcggcggcgttcctcctacagggctcgcag
atcgtgtgctgcggcccgctggagggcggcgggcccgagcaggagccccaggcggcggcg
ctgcgcgacacgcgcaacgtcgtcgcgcgggaacacgacatctgggcgcgggcgtggcag
gcgcggcaggcgcgcgagtag

DBGET integrated database retrieval system