Eremothecium gossypii: AGOS_ADR224W
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Entry
AGOS_ADR224W CDS
T00167
Name
(RefSeq) ADR224Wp
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
ago
Eremothecium gossypii
Pathway
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_ADR224W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ago03041
]
AGOS_ADR224W
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGOS_ADR224W
Spliceosome [BR:
ago03041
]
Complex C
Other components
Step II factors
AGOS_ADR224W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
nSTAND3
SLFN-g3_helicase
Cas3-like_C_2
AAA_23
Flavi_DEAD
T2SSE
ABC_tran
PhoH
AAA_29
AAA_16
DUF1509
Motif
Other DBs
NCBI-GeneID:
4620482
NCBI-ProteinID:
NP_984320
UniProt:
Q759P9
LinkDB
All DBs
Position
IV:1094688..1097960
Genome browser
AA seq
1090 aa
AA seq
DB search
MDPGLKEWIQQHTASNVTEKFVQTICNIARVHAYDPVKFTKSCMALGKFKGEEKFLHELL
VSLRSTQEERTNTTVKAVLDGERVKGNTSRNLVALSFEDSDDELETALEPDQSLGSGGQK
QKPLRFKRLDKAAARQLKEFAEGRRDQKSTLEQDDHGDKTEKLAFVPKLTAIADEDQIAT
LLAEDRAEGPAPLGTQESAAFGPEDLEEDRAWYNSDDESAIKTTANEADDAAAQMHMSTT
SSANTRESERVRITSIPLAERPAVIPPFLKAYKDKRGEEAIIGALDNTHMHDSGMIDPFK
NPESEFSANARRGSRLVAMRRLQKERKEHSAQTAAIVGTVVGNVLGVKQNDNKGTCDKTS
SQVSRQSFEDIQAQRRTLPVYEVKSQLLQVIRDNQVTVIIGETGSGKTTQLAQYLHEDGF
CRLGKQIGVTQPRRVAAMSVAERVALEMGVELGKEVGYAIRFEDKTSADTRLKFMTDGIL
LRETLIDDLLEKYACIIMDEAHERSLNTDVLLGFFKNLLTRRRNLKLIITSATMNASKFS
QFFGDAPQFTIPGRTFPVQINYTSYPVPDYVEAAVQQAASIHLSTSLLGDILIFMTGQED
IEATCDALKERIVDMRVKRKGSIMQDILADVEILPIYSALPADIQGRIFNKSDAKKRKIV
VATNIAETSLTIDGIKYVIDCGYSKLKVYNPRIGLYNLAITPISLANAQQRSGRAGRTGP
GIAYRLYTENTAIADMHPQSIPEIQRTSLASVLLLLKSLGIEDIFNFPFMDSPPSATLMT
SMFELWTLGALDNFGALTEMGSKMAKFPLQPSLSKILLLSAKYGCSEEMVTIVSMLSVPQ
IFYRPKERQKESDQARNRFVVPESDHLTLLNVFVQWKVHRYSLDWCRKNYLQYRSLRRAY
DIREQLIRAMLKEDVPIISSGSGWDILRKCICAGYVHQAARKSGLNQYVHLKNGMELKLH
PTSALAGMGDLPPYVVYHELLLTTKEYINLVTAVDPFWLMEYGALFYHVKFISNREVYGL
YPEEQDQDGEPVSESLANRVVACEQNRELLVTQLQQDQLKFNNNSTEASTKRGGNSSSSV
RIGFKKRKPL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggaccccggcttgaaggagtggatacaacaacataccgcatccaatgtcacagaaaag
tttgtgcagacgatatgcaatatagcgcgcgtgcatgcatacgatccagtgaagttcact
aagagctgcatggcgcttggcaagtttaagggggaggagaagttcctgcatgagctgcta
gtatccctgcggagtacgcaggaggagcgcacaaacaccacggtgaaggctgtccttgac
ggggagcgcgtgaagggaaacacatccagaaacttggtcgcgctgagcttcgaagattcg
gacgacgaactggaaacagcactggagccggaccagagcttggggagcggtggccagaaa
cagaaaccgctgagatttaagcgacttgacaaggcagcagcaaggcagctcaaagagttt
gcagagggtcgcagagatcagaagagcacgctcgagcaggatgatcacggcgacaaaacg
gaaaaactggcttttgtgcctaagctgacagcgatagcggatgaagaccagattgccact
ctgctggccgaggatcgcgccgagggtcctgcacctcttggcacacaagagagcgccgcg
tttggtcccgaggacctcgaggaagatagagcctggtataacagcgatgatgaatctgcg
atcaagactacagcaaatgaggcagacgatgctgcagctcagatgcacatgtctacgacg
tcatccgccaataccagagaaagcgaaagagtacgaattacatctataccgctcgcagag
cgccctgccgtgataccaccttttctgaaggcttataaggataagcgtggggaggaggca
atcataggcgcactagataatacccacatgcatgatagtgggatgatagatccgttcaag
aacccagagagtgaattttcggcgaatgcacgcagagggagtaggttagtggctatgaga
aggctacaaaaggaacgaaaagagcattctgcacagactgcagccatagtgggtacagtt
gttggcaatgtcttgggggtgaagcaaaatgacaataaaggaacttgtgataagacgtcg
agtcaggtttcaagacagtcctttgaagacatccaggcccagcgccgcacgctgcctgtt
tatgaagtaaaatcacagctgttgcaagtcatacgtgacaatcaagttactgtgattata
ggagaaactggttccggtaagactacacaattggcgcagtatctgcacgaagatggcttt
tgccgtttgggaaaacaaataggcgtaacacagccgcgaagggtagccgcaatgtctgtt
gctgagcgtgttgctctggagatgggtgtggaactaggaaaggaggttgggtatgcgatt
cggtttgaagataaaacgtccgctgacacgagattaaagtttatgacggacgggatcctc
ctgcgggaaacactaatagacgatcttcttgaaaaatacgcttgcattatcatggatgaa
gcgcatgagcgctcgctcaacactgatgtgcttctcggcttcttcaaaaacttgttgacc
agaagaaggaacttaaaattaattattacttctgcaactatgaatgcctcgaagttctct
caattctttggagatgcacctcagttcacaatacctggtcgtacgtttccggtgcaaatt
aactatacatcgtatccagtccccgactatgtcgaagctgcggtacaacaagctgccagt
atacacctctctacttcactcttaggggacattttgatatttatgacaggccaagaggat
attgaagcaacctgcgatgcgctcaaggaaagaattgtcgatatgcgtgtcaaaagaaag
ggatcaattatgcaggatattttagcagatgtggaaatattgccaatatactccgcattg
cctgcagatatccaagggagaatattcaacaagtctgatgccaagaagcgtaagatagtg
gttgctaccaacatagctgagacctctctgacgatcgatgggatcaagtacgtcatagat
tgtggctattccaaacttaaagtgtacaatccaaggattggactatataatttggccata
actccaatatcattggccaatgcgcaacagcggtctggtagagctggtcgtactgggccc
ggtattgcctacaggttatacacagaaaatactgccatagctgacatgcatccgcaaagt
attccggaaatacagcgtactagtttggccagtgtcctcttgttattgaagtcgcttgga
attgaagatatatttaatttcccattcatggacagtcctccttctgcgacactgatgact
tcaatgtttgaattatggacacttggcgccttggataacttcggtgctttgacagagatg
ggatcgaagatggcaaaattccctcttcaaccttctctatcgaagatactgctgctctct
gcgaagtatggatgcagtgaagaaatggtaacaattgtttctatgctttcggtgccgcaa
atcttttatagaccaaaggagaggcaaaaagaatcagaccaggctcgtaacaggtttgtg
gtccccgaatcagaccatctaactctactcaacgttttcgttcaatggaaggtgcaccgg
tactccctcgactggtgtcgtaaaaattacttgcaatatcgctccctccggagggcgtac
gatattcgagagcaattgatccgtgcgatgttaaaggaggatgtaccaatcatttcaagt
ggttctgggtgggatattttacgaaagtgcatatgtgcagggtatgttcatcaggccgct
aggaagagtggtttaaatcaatacgtgcatttgaaaaacggcatggagttaaaactacac
cccaccagcgccctggctggaatgggtgatctaccgccatatgtcgtttaccatgaacta
ctattgacaacaaaagagtacattaaccttgttaccgccgttgatccattttggttaatg
gaatacggagctttattctatcacgttaaattcatatcaaaccgtgaagtatatgggctc
tatccggaagaacaagatcaagatggtgaaccagtctccgaaagtttggctaacagagtt
gtcgcctgtgagcagaaccgtgaactgcttgttacgcaacttcaacaggatcaattgaag
ttcaacaataacagtaccgaagcatctacgaaacgtggtggtaacagtagctcgtcagta
cgaatagggttcaagaaacggaaaccattataa
DBGET
integrated database retrieval system
