Eremothecium gossypii: AGOS_ADR260C
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Entry
AGOS_ADR260C CDS
T00167
Name
(RefSeq) ADR260Cp
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ago
Eremothecium gossypii
Pathway
ago03013
Nucleocytoplasmic transport
ago03015
mRNA surveillance pathway
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_ADR260C
09122 Translation
03013 Nucleocytoplasmic transport
AGOS_ADR260C
03015 mRNA surveillance pathway
AGOS_ADR260C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ago03019
]
AGOS_ADR260C
03041 Spliceosome [BR:
ago03041
]
AGOS_ADR260C
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGOS_ADR260C
Messenger RNA biogenesis [BR:
ago03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AGOS_ADR260C
Spliceosome [BR:
ago03041
]
Complex C
Other components
EJC/TREX
AGOS_ADR260C
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AGOS_ADR260C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
4620518
NCBI-ProteinID:
NP_984356
UniProt:
Q759L6
LinkDB
All DBs
Position
IV:complement(1152647..1153963)
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AA seq
438 aa
AA seq
DB search
MSHEGEEDLLEYSDNEQEIQVDNTKATEVAGNGEEAADGKDGDKKGSYVGIHSTGFKDFL
LKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVP
GEVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTDTRKDIELLKNKDTAPHIV
VATPGRLKALVRDNNIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSA
TLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIRLEEREKNRKLAQLLDDLEFNQ
VIIFVKSTLRANELTKLLNASNFPAITVHGHMRQEERIARYKAFKEFEKRICVSTDVFGR
GIDIERINLAINYDMPSEADQYLHRVGRAGRFGTKGLAISLVSSKDDEEVLAKIQERFDV
KITEFPEEGVDPSTYLNT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgaaggcgaggaagatttattggaatattccgataacgaacaggaaatccag
gttgacaacacgaaggccactgaggtagccggtaacggagaagaggcagctgacggaaag
gatggagacaagaagggatcgtacgtaggtattcactcgacaggttttaaggattttctg
ttgaagccagagctttcccgggccattattgactgtggtttcgaacatccatctgaggtc
caacaacacaccatcccacaatcaattcacggtacggacgttctatgtcaggcaaagtcc
ggtctcgggaaaactgctgtgtttgtgttgtcaacgctgcagcaattggaccctgttcca
ggcgaggtatcagtggtcgttctgtgcaatgccagagaattggcttatcagatcagaaac
gagtacttgagattctcgaaatatatgccggacgtgaaaacagctgttttctatggtggc
acagacactaggaaggacattgagttgttaaaaaacaaagatactgcgccacatattgta
gttgcaacgccgggacggttgaaggcgctggtacgggacaacaatattgacttgtctcac
gttaagaactttgttatcgatgagtgtgacaaggtgttggaggagctcgatatgagaaga
gatgtgcaagacattttcagggcaactcctagagataagcaggtgatgatgttctctgct
acgctatctcaagagatcagaccgatctgtagacgtttcttgcaaaaccctctggagatt
tttgttgatgacgaagctaagttgaccttgcacggtttgcagcagtactatatcaggctt
gaggaacgtgagaagaaccgtaagctggctcaattgttggatgatttggaatttaaccag
gttattatcttcgtaaaatcgacacttagagcaaacgaattgactaagctgttgaatgct
tccaacttccctgcaattactgttcacggtcacatgagacaggaagagcgtattgcccgc
tacaaggccttcaaggaatttgaaaagcgtatctgtgtgtcaacagacgttttcggtagg
ggtattgatatcgagcgtatcaacctagcgatcaactacgatatgcctagtgaggcagac
caatacctccacagagtcggtagagcgggcagattcggtaccaaaggtctggctatttcc
cttgtgtcctcaaaagatgatgaggaggttttagctaagatccaagaacgttttgacgtg
aagatcaccgaatttccagaagaaggtgtcgacccatctacctatttgaacacttga
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