Eremothecium gossypii: AGOS_AEL181C
Help
Entry
AGOS_AEL181C CDS
T00167
Name
(RefSeq) AEL181Cp
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
ago
Eremothecium gossypii
Pathway
ago03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGOS_AEL181C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ago03019
]
AGOS_AEL181C
03041 Spliceosome [BR:
ago03041
]
AGOS_AEL181C
03009 Ribosome biogenesis [BR:
ago03009
]
AGOS_AEL181C
03016 Transfer RNA biogenesis [BR:
ago03016
]
AGOS_AEL181C
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGOS_AEL181C
Messenger RNA biogenesis [BR:
ago03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
AGOS_AEL181C
Spliceosome [BR:
ago03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
AGOS_AEL181C
Complex C
U4/U6.U5 tri-SnRNP related factors
AGOS_AEL181C
Ribosome biogenesis [BR:
ago03009
]
Eukaryotic type
Pre-60S particles
Helicases
AGOS_AEL181C
Transfer RNA biogenesis [BR:
ago03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
AGOS_AEL181C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
YodE
HTH_Tnp_ISL3
Death_3
Motif
Other DBs
NCBI-GeneID:
4620865
NCBI-ProteinID:
NP_984680
UniProt:
Q758E3
LinkDB
All DBs
Position
V:complement(296010..299225)
Genome browser
AA seq
1071 aa
AA seq
DB search
MDGDLFSVFGEEPKELPELPAEDIEQVPDEHQVETKKRGLSPSSNTKEESQQAESTAKKV
KKDKKLVDEKKKSEVVPVLADSFEKEASREVEASSGLATADAAQVEENGKMKLRHQVRHQ
VALPPNYDYKPIGQHIRTNEARTYPFTLDPFQDTAVSCIDRGESVLVSAHTSAGKTVVAE
YAIAQSLREKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEIL
RSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEF
AEWICRIHSQPCHIVYTDFRPTPLQHYLFPAHGDGIHLVVDEKGTFREENFQKAMASISN
QLGDDSNSATSKGKRGQTYKGGAAKGDAKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEEL
ALKMSKLDFNSDEEKDALTKIFNNAISLLPEADRELPQIKHILPLLRRGIGIHHSGLLPI
LKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGKQFRWVSGGEYIQMSG
RAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLMRVEGISPE
FMLEHSFYQFQNITSMPVMEKKMNELSKKLEDIHVDDESNVKDYYDIRQTLDAYNEDVRK
VMTHPANVLSFLQPGRLIKINVGGKQDYGWGAVVDFAKRINKRDPTAVYADHDSYIVNVV
VNTMYKDSPLNLLKPFNPVLPEGIRPAADGEKTTCALISITLDSIQGLGNLRIFMPSDIK
ADSQKEVVGKTLKEVQRRFPKGIPLLDPIKNMKLEDEEFLKLLKKIEILESKMNSNPIAN
SVKLQELYEKYSEKVAMQNDIKHLKSKMNEAQAVIQLDDLRRRKRVLRRLGFCSASDIIE
LKGRVACDISSGDELLLTELILNGNFNELKPEQAAALLSCFAFQERCKEAPRLKPELAEP
LKAMREVAAKIAKVIKDSKLEIVEKDYVESFRHELMEVVYEWCRGASFTQICKMTDVYEG
SLIRMFKRLEELIKELIDVSNTIGNVTLKEKMEAALHMIHRDIVSAGSLYL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgatttatttagtgtgtttggcgaagagccaaaagagttacctgagttgccc
gctgaggatattgaacaagtgcccgatgagcatcaggtcgaaaccaagaaacggggcttg
tcgccaagtagcaatacaaaggaggaatctcagcaagcagagtccacggctaagaaagtt
aaaaaggacaagaaactagtcgatgagaaaaagaagtcagaagtggttcccgtgctggca
gattcgtttgaaaaggaggcatcgagagaggtcgaagcgtcgagcggcctagctacagcc
gatgctgcacaagtcgaggaaaacggaaagatgaagctacggcatcaggtgcgccatcag
gttgcattgcccccaaactacgactacaagcctattggacagcacatacgtacaaatgag
gcgaggacttatcccttcacgctagatccgttccaggacacggcggtgtcctgcatagat
cggggcgagtcagtactagtttctgcgcatacatcggcaggtaagacagttgtggcggag
tatgccattgctcaatcgttgcgcgaaaaacagcgggtcatctacacatctccaattaag
gcattgtcgaaccagaagtatagagaactccttgctgaattcggggatgttggtctgatg
acgggtgatatcaccatcaacccagatgctggctgcttggtcatgactaccgaaattctg
aggagtatgctgtaccgaggaagtgaggtcatgagagaagttgcctgggtcatatttgat
gaagtgcattatatgcgtgacaaggagagaggagttgtttgggaggaaacgatcatcttg
ttgccggacaaggtgcgctatgtcttcttgtcggccacgattcccaatgcgatggagttt
gccgagtggatatgtagaattcattcccagccatgccacatcgtttacacagactttcgt
ccaaccccactgcaacactatttattccccgcccatggcgacggtatacacttggtagtt
gatgagaaggggacattccgcgaagaaaatttccagaaggcgatggcgtccatcagtaat
cagctgggcgatgattctaactccgcaacgtccaagggtaaacggggacagacctacaaa
ggaggtgcggccaagggagacgcgaagggcgacatttacaaaatagttaaaatgatttgg
aagaagaagtacaatcctgttattgtgttttctttcagtaagagggactgtgaagagctg
gcccttaaaatgtcgaagttggattttaactctgatgaggagaaggatgcgctgacaaaa
atattcaacaatgccattagcttgcttccggaagcggaccgtgagctacctcagattaag
catatcctgccacttttgagacgggggatcggtatacatcattctggtttgttgccaata
ttgaaggaggttattgaaattctcttccaagaaggatttttaaaggtgttgttcgctaca
gaaacattttccatcggcttaaatatgcctgcgaagactgtggtgtttacaagcgtcaga
aagtgggacggtaagcagtttcgctgggtttctggtggtgaatatattcagatgtctggt
cgtgcaggccgtcgtggcttggatgatcgtggtatcgtcatcatgatgatagacgaaaag
atggaaccgcaagtggctaagggtatggtcaaaggtcaagcggatagactggactcggca
tttcacttggggtacaacatgatcttgaacttgatgcgagtggaaggtatttcccctgag
ttcatgttggagcattctttttaccagtttcagaatatcacttcgatgccagttatggag
aagaagatgaatgagctttctaagaaattggaagacatacacgtcgatgatgaaagtaat
gtgaaagattattacgatatcaggcagacacttgatgcgtacaatgaagacgtaagaaaa
gtcatgacgcatcctgcgaatgtgttgagcttcttacaaccagggcgcttaataaagatc
aatgtcggcggtaaacaggattacggctggggcgctgtggttgattttgcaaagagaata
aacaagcgtgaccctactgcagtatatgcagaccacgattcttacattgtcaatgtggtg
gttaataccatgtacaaagattctccgctcaacttgttgaagcctttcaatccagtgctc
ccggagggtatcaggcccgccgcagacggcgagaaaaccacctgtgccttgatctcaatc
acattagactccatacaaggcttagggaacctcagaatttttatgcctagtgatataaag
gcggacagccagaaggaggttgtgggtaaaacgttgaaggaggttcagcgccgcttcccc
aaggggattccattgctagacccaatcaaaaatatgaagttggaggatgaggaattcctg
aagcttctgaagaagattgagatcttggaatcgaagatgaactccaatccgatagctaac
tccgtgaagctccaagagctatatgagaaatacagcgaaaaggttgctatgcagaatgac
attaaacacttgaaatcgaagatgaatgaagctcaagcggtcatccaactggacgaccta
cgtcgccgcaagcgggttcttcgccgcctgggcttttgctctgcatcggacatcattgaa
ttgaaaggtagggttgcatgtgacatttcatcaggcgacgaactgctgcttaccgagtta
attttgaatggtaattttaacgaactgaaaccggaacaggctgcggctttgctatcatgc
tttgccttccaggaacggtgtaaagaggcgcctaggttgaaaccagagcttgcggagcca
ttaaaggccatgcgtgaggtagcagcgaaaattgccaaagttattaaggactccaagcta
gaaatagtcgaaaaagactacgttgagagctttagacatgaacttatggaggtcgtttac
gaatggtgcagaggtgcttccttcacccaaatctgtaaaatgacagacgtttatgaaggt
tcactcattagaatgttcaagagacttgaggaactcataaaagagcttattgacgtctcc
aacacaattgggaacgtgacactcaaggaaaaaatggaggccgcactgcacatgatacac
agagacatcgtctctgcgggctcgctatacttgtaa
DBGET
integrated database retrieval system
