Eremothecium gossypii: AGOS_AER408W
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Entry
AGOS_AER408W CDS
T00167
Name
(RefSeq) AER408Wp
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ago
Eremothecium gossypii
Pathway
ago03013
Nucleocytoplasmic transport
ago03015
mRNA surveillance pathway
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_AER408W
09122 Translation
03013 Nucleocytoplasmic transport
AGOS_AER408W
03015 mRNA surveillance pathway
AGOS_AER408W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ago03019
]
AGOS_AER408W
03041 Spliceosome [BR:
ago03041
]
AGOS_AER408W
03009 Ribosome biogenesis [BR:
ago03009
]
AGOS_AER408W
03012 Translation factors [BR:
ago03012
]
AGOS_AER408W
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGOS_AER408W
Messenger RNA biogenesis [BR:
ago03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AGOS_AER408W
mRNA cycle factors
Stress granule specific factors
AGOS_AER408W
Spliceosome [BR:
ago03041
]
Complex C
Other components
EJC/TREX
AGOS_AER408W
Ribosome biogenesis [BR:
ago03009
]
Eukaryotic type
90S particles
Helicases
AGOS_AER408W
Translation factors [BR:
ago03012
]
Eukaryotic type
Initiation factors
eIF-4
AGOS_AER408W
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
Flavi_DEAD
NAT10_TcmA_helicase
TniB
Motif
Other DBs
NCBI-GeneID:
4621479
NCBI-ProteinID:
NP_985263
UniProt:
Q755W0
LinkDB
All DBs
Position
V:1417842..1419038
Genome browser
AA seq
398 aa
AA seq
DB search
MSFDRNQDGKLKVKTSSKLPVSPTFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRG
KDVIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNV
VALACTGGKALQQDISKVNKGCHVMSGTPGRVLDMIKRRIINTRHVKMLVLDEADELLSE
TLGFKQQLYDIFTKLPSSVQVVVVSATMSKDVLEVTKKFMSDPVKILVKRDEVSLEGIKQ
YHINVDKEEWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSHKLIQNNFAVASIHGDMKQ
DDRDKVMSDFRSGSSRVLISTDVWARGIDVQQVSLVINYDLPELLENYIHRIGRSGRFGR
KGVAINFITREEVTKLKSIEKHYSIKIKPMPADIDSLS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatagaaatcaagatggtaagctgaaggtcaaaacttcctccaagttgccg
gtatcgccgacgttcgagtctatgaaactacaggagaacctgctacggggtatctatggg
tatggcttcgaagctccttctgcaattcagtcgagggctatcacgcagatcatccgaggt
aaggatgtcatcgcgcaagctcagtcaggcaccggtaagacagcaaccttcacgataggt
atgttacaggtgatcgattcgagcagcaaggacttacaggctctagtgctgtcgccgact
cgagagcttgcagcgcaaatctcgcaggtagtgcgtaacttgggagattacatgaacgtt
gtagctcttgcttgcactggggggaaggcgctgcagcaggatataagcaaggttaacaag
ggctgccatgtaatgagcggtaccccaggtcgggtactcgatatgattaaacgtcggatt
ataaacaccaggcacgtgaaaatgcttgtgttagatgaggctgacgaactcctgagtgag
acactaggtttcaagcagcaactttacgatatcttcacaaaattgccatcgtcagtgcaa
gtggtggtggtaagcgctacgatgagtaaggacgtgttggaggtcaccaaaaagttcatg
tctgatccagtcaagattttggtaaagcgggacgaggtgtcgctggaaggcataaagcaa
taccatataaacgtggataaagaagaatggaagttcgacacgctttgcgatttgtacgat
tccctgactatcacccagtgtgtgatattctgtaacacaaagaaaaaggtggattggctg
tcgcacaagctgatacagaataactttgcagtcgcgtccatacatggagacatgaagcaa
gatgaccgagacaaagtcatgagtgactttaggtcaggcagctcccgcgtgcttatttcc
acagatgtgtgggcccgtgggattgatgttcaacaggtttcgctggttatcaactacgat
ctgcctgaacttctcgagaactacatccatcggataggccgttcgggcaggtttggaaga
aagggggtagcaataaatttcattacaagagaagaggtcaccaagctgaagtcaatcgaa
aagcattattcgatcaaaatcaagccaatgcccgcagatatcgacagtctttcctag
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