Eremothecium gossypii: AGOS_AFL221C
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Entry
AGOS_AFL221C CDS
T00167
Name
(RefSeq) AFL221Cp
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ago
Eremothecium gossypii
Pathway
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_AFL221C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ago03041
]
AGOS_AFL221C
03009 Ribosome biogenesis [BR:
ago03009
]
AGOS_AFL221C
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGOS_AFL221C
Spliceosome [BR:
ago03041
]
Complex A
U1 snRNP components
U1 related factors
AGOS_AFL221C
Complex B
AGOS_AFL221C
Ribosome biogenesis [BR:
ago03009
]
Eukaryotic type
Pre-60S particles
Helicases
AGOS_AFL221C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
DUF5335
Motif
Other DBs
NCBI-GeneID:
4621553
NCBI-ProteinID:
NP_985329
UniProt:
Q755N4
LinkDB
All DBs
Position
VI:complement(join(24180..24577,25244..26519))
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AA seq
557 aa
AA seq
DB search
MSYAGNRDQQFNRSNFGGRDGDHRGQRPSDRNSYGRDGFGRGGRGGFAGRGRGRSDDRLE
LTKPDWDVESLPKFEKNFYVEHEDVQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAG
FPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQP
LLSPGDGPVVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEI
LIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA
TWPKEVQQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDK
DSKIIIFASTKRTCDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDV
AARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIM
REAKQEIPQDLLVYDRAPRGGFHPRYGGRGGRGGRGGRGGRGYGGYGGGYGGYGGGYGGG
HGGYGGKPKDSGWGNRN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgccggtaacagagaccagcagtttaacagaagcaacttcggtggacgcgat
ggcgaccatcgcggacagcggccttcggatcggaattcgtacggaagggatggtttcggg
cgcggcgggcgcggcggcttcgccgggcgtggccgtggccggtccgacgataggttggag
ttgacgaagcccgactgggatgttgaatcgttgccaaaatttgagaaaaacttctacgtg
gagcacgaggacgtgcaaaagatgagcacggacgaagtggagcagttccggaaggagaac
gagatgaagattgttgggcacgatgttcccaagcccatccggactttcgacgaggcgggc
tttccggagtacgtgttgaaggaggtcaaggaagagggattcgagaagccaaccgcgatt
cagtgtcaaggctggccaatggccctatctgggcgcgacatgatcggtgtggctgcgaca
gggtctggtaagacgctttcgtactgtctaccgggcattgtgcacatcaacgcgcagccg
ctgctttctcctggtgacgggcctgttgttttggtcctagcacccacaagagagttggct
gtgcagattcagaaggaatgctctaagtttggccgctcctcgcggattagaaacacttgt
gtttacggtggtgttcctaagtcgcaacagattcgcgacttacagcgcggtgtggagatc
ttgatcgccaccccaggccgtttgatcgacatgttggagatcggcaagaccaacttaaag
cgtgtgacctacttggtcttggacgaggctgatcggatgttggacatgggtttcgagcca
caaattcggaagatcgttgaccagatccgtccggaccgtcagacacttatgtggtccgcg
acctggcccaaggaggtccagcaactagccagggactacttgcatgaccctattcaggtg
aacatcggctcgttggagttggcagcgtctcacacaattactcaacttgttgaggttgtc
tctgactttgacaagagagacagattggtgaagcacctggaaattgcatccaaagacaag
gactctaagattattatttttgcatcgacgaaaagaacttgtgacgagattacgtcttac
ttaagacaggatggatggccagctcttgctatccatggtgataaacagcagcaggagaga
gactgggttttgaacgagttcagaaccggcagatctcctatcatggttgccactgatgtg
gctgccagaggtatcgacgttaagggtattaactttgtcatcaactatgacatgcccggt
aatatcgaggattacgttcacagaattggtagaactggtagagctggtgcaactggtact
gccatctcgtttttcaccgaagccaacaagaccctgggtgctcagttgatttctatcatg
agagaagctaagcaggaaattccccaggatttgcttgtgtacgaccgcgccccacgtggt
ggattccacccaagatatggcggtcgcggcggtcgcggcggtcgtggcggtcgtggtggc
cgtgggtatggtggatacggcggtggatacggcggctacggtggtggctacggtggtggc
cacggcggctacggtggtaagccaaaggacagcggctggggcaacagaaactaa
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