Eremothecium gossypii: AGOS_AFR053C
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Entry
AGOS_AFR053C CDS
T00167
Name
(RefSeq) AFR053Cp
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ago
Eremothecium gossypii
Pathway
ago03018
RNA degradation
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_AFR053C
09123 Folding, sorting and degradation
03018 RNA degradation
AGOS_AFR053C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ago03019
]
AGOS_AFR053C
03041 Spliceosome [BR:
ago03041
]
AGOS_AFR053C
Messenger RNA biogenesis [BR:
ago03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AGOS_AFR053C
mRNA degradation factors
5'-3' decay
Lsm complex
AGOS_AFR053C
Spliceosome [BR:
ago03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AGOS_AFR053C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Hfq_1
Motif
Other DBs
NCBI-GeneID:
4621841
NCBI-ProteinID:
NP_985600
UniProt:
Q754L9
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All DBs
Position
VI:complement(join(526403..526738,526799..526810))
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AA seq
115 aa
AA seq
DB search
MNDSEKPRHDQHGQQPKRKFEGPKREAILDLAKYQDTQVRVKLMGGRLVTGVLKGYDQLM
NLVLDETVEYLRDEEDASVVTQRTRPLGLIVIRGTILLSLSPAAGGAVVPGPAAE
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactccgagaagccgagacatgaccagcacgggcagcagccgaagcgcaagttc
gagggcccgaagcgcgaggccatcttggacctggccaagtaccaggacacgcaggtgcgc
gtcaagctgatgggcgggcggctcgtgacaggcgtgctcaagggctacgaccagctgatg
aacctggtgctggacgagaccgtggagtacctgcgcgacgaggaggacgcgtcggtggtg
acgcagcgcacgcggccgctggggctgatagtgatccgcggcacgatcctgctatcgctg
tcgccggcggcgggcggcgcggtagtgccgggccccgcggccgagtga
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