Eremothecium gossypii: AGOS_AFR058C
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Entry
AGOS_AFR058C CDS
T00167
Name
(RefSeq) AFR058Cp
KO
K12879
THO complex subunit 2
Organism
ago
Eremothecium gossypii
Pathway
ago03013
Nucleocytoplasmic transport
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_AFR058C
09122 Translation
03013 Nucleocytoplasmic transport
AGOS_AFR058C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ago03019
]
AGOS_AFR058C
03041 Spliceosome [BR:
ago03041
]
AGOS_AFR058C
Messenger RNA biogenesis [BR:
ago03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AGOS_AFR058C
Spliceosome [BR:
ago03041
]
Complex C
Other components
EJC/TREX
AGOS_AFR058C
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AGOS_AFR058C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
4621846
NCBI-ProteinID:
NP_985605
UniProt:
Q754L4
LinkDB
All DBs
Position
VI:complement(530829..535610)
Genome browser
AA seq
1593 aa
AA seq
DB search
MLAVDELNALAREHVPHAREVFTDEFLKDWATNADRLIAEYRTLAKASEQVDFVYRVFAE
GLLFTQGALRGLVGDYGPLASLLAALCENSSANARILANLINCFPRHGGDEANMVELLQQ
LTGMDFEFSASLVEKLLLHRWAKEQTSLYKRSLISEKYHLKKYNLLFESPLGFSQICMLL
HVAYADKDRFQSADYYWRQIQFVAGKYTLDPIRVLDVILRVSSVHVHHHHEFLVLLLQRS
DYWPLQRSDPFAWETLNVGGSAVAAQLIAHKLKNEKFDHRYMDMVCVLIREGFVSYLSIF
DSLGPDDETLAKYVDEYYADLCKQSQEGSLNPLAMAAALPDEDDGPPGATDSKGEDKAAQ
AALSEQKERDEQKQERERKNRQYKVKRTGKWRLVTSCLNHGLLIPALYSIRTNEKTALSI
DILVESVLRLFEHMIRPLHEKAINAPSYQPTPRVKMKMTHSGLPSKQGRLIYECLSPNVK
EKYLLNTRYVFYYSCWADRLPVIGDVDGLFYHSHEILGLVGSKLSASPTLISMLSSIGVH
DILSSENSELVTEKWINYFRKFIFPALGGLEEDFIANINAYNLLKLFPFEKRYFLYHEMY
SKISDSDIFVRLTFNKVQRKVRGLLKSLSIDHIDDKVNEVSRLVSSNPLAALEPIVNQIE
NYDKVSELVVIAAKGFPDFAYDVLQYVLLLKLTSGRDILQIDGINQHTWIQRLSVFIAGL
ANSCPKMDLTNILIFTVKNLHKDYNASLPVLKELVSKVGGIQSLNHISWKQLQMLNSGPS
LQKTARSRILDTRQENFEAARSITQTFIKIGAISELLVMLCNLNVVSQSPDIHYKILSTK
CDDSNSLLWTLIEMFKFTLTREEFLHNVLPFDELVNDYNVPTEWSFFIWRDYIDEMRHEG
DSSIKQIDYILEKTEFRHVSFEHLDKPLFTSFWKLTLYDVNFNKELYDETTKALNTKLDR
TKLQRDKNAILNEVQEVMSNCLAHQKAFKNVQEMFQDKRSVWFPELTPERVQAYIQFCIL
PRTLFSSSDATYSALFTIALLGVHDSIAVFEKMVESHVLGGLLFSCTVSESTNVGFFYGM
IIRTFEQARSEEAFDNSKLSRLHHLYSVLLYDLRLLLSETNYMSIRNTIEFLNQISPIFP
VVDEQIREACRSLESKLSDETREDIKLPCNALIGHLKSRMKTACKKQDFYELPKEEQIEI
DNFEKEQAKINEYEVAVAKETERKKLEEVKPRKEAAKAVSSTSEKKGTSYSSSSDSKEYE
KSQTSEDVRPISYQGTQILENIDSICKLLNSEGVDDLPQYIRVLYFKDEMRKELSNYKGN
LDVFRKKLAAILTDYFYSMVKWPNSNPLFAQKAAELEASCMQCGPPTSKATKMKVMADDL
YGDDIPFNTSNTKTAKPQRESRFSDVKVPAAAASEAKPADSKPQLDRFNKNSVKENPRAQ
SRFKESAPKQPSPAPKKDEKPSGSRFHNSKPAAPKIPPPKPEPKSVNLRDRVGSRFEGRQ
DPASRFSGAHSESTRYPQSSARQLEPSPESRFRNVAKDSPRKRPTTDYRYNVDTKRPRKE
DEHRRKPNSDRRPDAQPVLPTGPKGSGTFSRFR
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgtggatgaactcaatgcgctggcccgggagcacgtgccgcacgccagagag
gtgttcacggatgaatttctgaaagactgggcgacgaacgcggacaggctgatagcagag
taccggacgctcgcgaaggcatcggagcaggtggactttgtgtacagggtgtttgcggag
gggctgctgtttacgcagggggcgctgcgcgggctggtgggggactacgggccattggcg
agcctgctggctgcgctgtgcgagaacagctcggccaatgcgcggatactagcgaacctg
atcaactgctttccgcgccacgggggagacgaggcgaacatggtggagctgctgcagcag
ctgacggggatggactttgagttttcggccagcctggtggaaaagctgctactgcatcgg
tgggcgaaggagcagacgtcgctgtacaagcgcagcttgatctccgagaagtaccacctc
aagaagtacaatctgctgtttgagagccctctgggcttttcgcagatatgtatgctgctg
catgtggcgtacgcggacaaggaccgcttccagagcgcggattactactggcgacagatc
cagtttgtcgcgggcaaatacacgctggacccgatccgcgtgctggacgtcattctgcgc
gtgtcctccgtccatgtgcaccaccaccacgagttcttggtgctgctgctgcagcgctcc
gactactggccattgcagcggtcggacccgtttgcgtgggagacactgaacgtcgggggc
agcgcggttgccgcgcagctgattgcgcataagctgaagaacgagaagtttgaccatcgg
tacatggacatggtgtgcgtgcttatccgcgagggctttgtctcgtatctctcgatattc
gactccctgggccccgatgacgagacgctggccaagtacgtcgacgaatactacgctgac
ctgtgcaaacagtcgcaggagggaagcttgaacccgctggcaatggccgctgctttgcca
gacgaggacgatggcccgccaggtgccacagacagtaagggcgaagacaaagcggcccag
gcagcgctctcagagcagaaagaaagggacgagcaaaagcaggagcgcgaacggaagaat
aggcagtacaaggtgaagcgcacggggaagtggcgactagtaaccagctgtctgaatcac
ggcctgttgattcccgcgctgtactccataaggaccaacgagaaaacggctctgtcgata
gatatcctcgttgagtccgttttacgtctctttgagcacatgattagacctttgcatgag
aaggctatcaacgctccttcatatcaacctacccccagggtgaaaatgaaaatgactcat
agcgggctacccagcaagcagggccgcttaatctatgaatgtctttctcctaatgtcaag
gaaaaatatttactgaacacaagatatgttttctactacagttgctgggcagacaggctg
ccggttattggggatgtggatggtttgttctaccactcgcacgaaattttgggccttgtt
ggctccaagctgtctgcttcgccgactttaatcagtatgttgagttcaattggtgtccat
gacattctaagctctgagaattccgagctggtcaccgaaaagtggattaattatttcagg
aaattcatctttcctgcgctgggtggactggaagaggacttcatcgctaatatcaacgct
tataatttgctcaagctcttcccctttgaaaagcgatactttttataccacgaaatgtac
agcaagatatccgattctgacatattcgtgcgcctaactttcaataaggtacagcggaaa
gttcgcgggctcctgaaatcattaagtatagatcatatcgatgacaaagtcaatgaagtg
tccaggctggtctctagtaatcctctagctgcactagaaccaattgtcaatcagatcgag
aattacgacaaggtctccgaactggtcgtaatagcagcgaagggtttcccagattttgca
tacgacgtacttcaatacgtattactgttgaagttgacttcaggaagggatatcttgcaa
attgacggtatcaaccagcacacgtggatccagcgcttatccgttttcattgcagggttg
gcgaactcgtgcccaaaaatggatctaactaatattctcatcttcacagtgaagaatctg
cacaaagattacaacgcctctcttcctgtcctgaaggaacttgtatccaaggtcgggggt
attcagagcctaaatcatatcagttggaaacaacttcaaatgctcaattctgggccgtct
ttgcagaaaacggcgaggtctcgcatcctagatactaggcaagagaatttcgaagctgca
aggtcaataacacagactttcatcaaaattggcgctatctctgagctgctggtgatgttg
tgcaatttaaatgtcgtttcccagtccccagacatacattataaaatcctctccaccaag
tgcgacgattcgaattctctactctggaccttgattgagatgttcaaattcacactgacc
cgcgaagaatttcttcacaacgttttgccatttgatgagctagttaacgactataatgtg
ccaacggaatggagtttttttatctggagagattatatcgatgagatgagacatgaaggc
gattcttcgataaagcaaatagactatattcttgaaaagaccgaattcaggcatgttagt
tttgagcaccttgacaagccattgtttacaagcttttggaaactcaccctgtatgatgtg
aactttaacaaggagttatatgatgagacaacgaaggccttgaacaccaaattggataga
actaagcttcagcgtgataaaaacgccattttaaatgaagtacaagaggtgatgtccaac
tgccttgcacatcaaaaggctttcaagaatgttcaagaaatgttccaggataaaagaagt
gtttggttccctgaactaaccccggaaagggttcaggcttatatccagttctgcatcctc
cccaggactctgttctcttcctcagatgccacttatagtgcactgtttaccattgcgctg
ttgggcgtgcatgactcgattgctgtctttgaaaaaatggtagaatcgcacgttctcggt
ggtttgttgttttcttgcactgtttctgaatcaacaaacgttggtttcttctatgggatg
attatcaggacttttgaacaagctaggtctgaagaggcctttgacaacagcaagctctca
cggctccaccatttgtactcagttcttctttacgacttgagactactactgtctgagacc
aattatatgtccatcaggaacaccatcgaattcctgaaccaaatatctccgattttccca
gtggttgatgaacagatccgtgaagcttgcagatcattggaatctaagctttcagatgaa
acacgggaagatatcaagctaccatgcaatgccctgattgggcatctgaaaagtcggatg
aaaacagcatgtaagaaacaggacttttatgaacttccgaaggaggaacagattgaaatt
gacaacttcgagaaggaacaagcaaaaataaatgaatacgaagtagcagtagcgaaggaa
acagaaaggaagaagctagaagaagtgaagccgcgtaaggaagcagcaaaggcggtatcg
agcacaagcgaaaaaaaaggtacgagctatagcagcagctcagacagtaaggaatatgaa
aagagccaaacttcggaagatgtgcgccctatatcatatcaaggaacccaaatccttgag
aatatagatagcatttgcaaactgttgaactcagaaggagtggacgatcttcctcaatat
attcgtgtcttatacttcaaggatgaaatgaggaaggaactaagtaactacaagggaaac
ttggacgtctttcgcaagaagcttgctgcaattctcactgattatttctatagcatggtg
aaatggccgaacagcaatccgctgtttgctcagaaggctgccgagctcgaagcgtcctgt
atgcaatgcggaccaccgacttcgaaagccacaaagatgaaggtaatggcagatgattta
tatggtgacgatatccctttcaacacctcgaataccaaaactgcaaagccgcaacgcgag
agcaggttttcagatgtcaaggtacccgcagccgctgcctccgaggcgaaacctgcggat
agtaaaccgcaattggaccgctttaataagaattccgtgaaggaaaatcctagagcccag
tcgagatttaaggaaagcgctccgaagcagccctcgccagcacctaagaaggatgagaag
ccctctggatcccggtttcacaactcgaaacctgcggcgccaaaaatacctcctccaaaa
ccagaaccaaaatctgttaaccttcgggacagagttggttcccgtttcgaaggtagacag
gatccagccagtcgcttttccggggctcattccgagagcacgaggtatccgcaatcttcc
gcccgtcaacttgagccaagccctgagagcagattccgtaacgtcgccaaagattcaccg
cgtaaacggcctacaactgactaccgctacaatgtagacactaaacgcccgcggaaggaa
gatgagcacaggcgcaaacccaacagtgatcgccgtcctgatgcacagccagtccttccc
acaggtccgaaaggcagtggtacattcagtagatttagatag
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