Eremothecium gossypii: AGOS_AFR634W
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Entry
AGOS_AFR634W CDS
T00167
Name
(RefSeq) AFR634Wp
KO
K12880
THO complex subunit 3
Organism
ago
Eremothecium gossypii
Pathway
ago03013
Nucleocytoplasmic transport
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_AFR634W
09122 Translation
03013 Nucleocytoplasmic transport
AGOS_AFR634W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ago03019
]
AGOS_AFR634W
03041 Spliceosome [BR:
ago03041
]
AGOS_AFR634W
Messenger RNA biogenesis [BR:
ago03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AGOS_AFR634W
Spliceosome [BR:
ago03041
]
Complex C
Other components
EJC/TREX
AGOS_AFR634W
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AGOS_AFR634W
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
MIOS_WD40
Beta-prop_NUP159_NUP214
NBCH_WD40
Tricorn_2nd
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
4622469
NCBI-ProteinID:
NP_986181
UniProt:
Q752E2
LinkDB
All DBs
Position
VI:1597728..1599200
Genome browser
AA seq
490 aa
AA seq
DB search
MHLNVEPTPRNHHNQTVPSSMEGGSKSSSAGPSQAESLTPERASKLYKRFFNVWKQRAVR
IRDDHFHRMEHPSRLERRPTVNNRVIALASNSVGSLATWARTDGSITVMNVATERYSFTI
KEAQGVGKLCLSIAWNPVEADQFVTVGTSTSVKLWNASDSKNPLLKTLVTGSRIKNYKCL
FDPLGQWLLVLTKASEIYLYAATEGYRLHSISKIQPEHEAGAGSCDTVESVAWLNDGQHI
ILGFKLGSIKIFKLGDAGFEIRNTMFGHLKTITSLAVDPWGLYFVAGSEDGSCSLWSLKD
FTCKTVHSEPEGVVESVSISDDGFVLAVGSRMSSREQSKFSFRSLLGQENMYEISFNSNA
NSLVHFIPETMKVLFTEERDIVTILKSTCSSILYTSEESEKMEAGLAATSNVKRMIAARD
EERKSSKKRRADKLRTVERSKEPSIRSKLDEGGRQHRRIEERSLRREEDLRGRGEAVGRY
GRDEYVPKRF
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgaatgtcgaacccacaccaagaaatcaccataatcaaacagtaccctcttcg
atggaaggcggatcaaaatccagcagtgctggccccagccaggccgaatccctcactcct
gagagggctagcaagctttacaaaagattctttaatgtatggaaacagcgagcggtgagg
atccgcgacgaccatttccaccggatggaacatccttctaggttagaaaggcgaccaacc
gtcaataatcgagtaattgcattggcaagtaactctgtggggtcacttgcgacatgggcg
aggacagacggaagtattactgtaatgaacgtcgcaacagaaagatacagttttacgatt
aaggaagcgcaaggtgtaggaaagttatgtctgtcgattgcatggaatccagtagaagcc
gaccagtttgtcactgttggcacttcgacatctgttaaactgtggaacgcttcggatagt
aaaaacccattattaaaaactctagtcactgggtcaagaattaagaactataaatgctta
tttgatcccctagggcagtggttgctcgttctgacgaaggctagtgaaatctacttgtat
gctgctaccgaaggctaccgattgcactcgatatccaagattcaacctgaacatgaagct
ggcgcggggagttgtgatactgtggagtcagtggcgtggctaaatgatggccagcatatt
atactaggttttaagcttgggtctataaaaatatttaaactgggagatgctgggtttgaa
attcggaatacaatgtttggtcatttgaaaaccataacttcgcttgcagttgatccatgg
ggtctttattttgtcgcaggctctgaggatggctcctgttctctttggtcgctcaaagat
tttacatgcaaaacagtacattccgagcctgagggtgtcgtagagagcgtgagcatttca
gatgacggatttgttttggcagtgggatcacggatgtcatctagagagcagagtaagttc
tcatttcgttcacttctaggtcaggagaacatgtatgagatttccttcaatagcaatgcc
aattcgctagtgcactttatcccagagaccatgaaagtactctttacggaggaaagagat
atcgtcacaatactaaagtcaacctgcagttcaatattatataccagcgaagagtcggag
aagatggaagcgggtttggctgccacatccaacgttaagaggatgattgctgccagggat
gaagagcgtaagtcatccaagaagcgcagagcagataaactgaggacggtggaaaggagt
aaggaacctagcatacgaagcaagctggatgagggtggccggcagcaccgtcggatagaa
gaaagatctcttcggagagaagaagacttgcgcggccgcggggaagcagtcgggcgctac
ggacgtgatgagtatgtaccaaagaggttttag
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