KEGG   Eremothecium gossypii: AGOS_AFR634W
Entry
AGOS_AFR634W      CDS       T00167                                 
Name
(RefSeq) AFR634Wp
  KO
K12880  THO complex subunit 3
Organism
ago  Eremothecium gossypii
Pathway
ago03013  Nucleocytoplasmic transport
ago03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ago00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGOS_AFR634W
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGOS_AFR634W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ago03019]
    AGOS_AFR634W
   03041 Spliceosome [BR:ago03041]
    AGOS_AFR634W
Messenger RNA biogenesis [BR:ago03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     AGOS_AFR634W
Spliceosome [BR:ago03041]
 Complex C
  Other components
   EJC/TREX
    AGOS_AFR634W
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AGOS_AFR634W
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 EIF3I WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd MIOS_WD40 Beta-prop_NUP159_NUP214 NBCH_WD40 Tricorn_2nd Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 4622469
NCBI-ProteinID: NP_986181
UniProt: Q752E2
LinkDB
Position
VI:1597728..1599200
AA seq 490 aa
MHLNVEPTPRNHHNQTVPSSMEGGSKSSSAGPSQAESLTPERASKLYKRFFNVWKQRAVR
IRDDHFHRMEHPSRLERRPTVNNRVIALASNSVGSLATWARTDGSITVMNVATERYSFTI
KEAQGVGKLCLSIAWNPVEADQFVTVGTSTSVKLWNASDSKNPLLKTLVTGSRIKNYKCL
FDPLGQWLLVLTKASEIYLYAATEGYRLHSISKIQPEHEAGAGSCDTVESVAWLNDGQHI
ILGFKLGSIKIFKLGDAGFEIRNTMFGHLKTITSLAVDPWGLYFVAGSEDGSCSLWSLKD
FTCKTVHSEPEGVVESVSISDDGFVLAVGSRMSSREQSKFSFRSLLGQENMYEISFNSNA
NSLVHFIPETMKVLFTEERDIVTILKSTCSSILYTSEESEKMEAGLAATSNVKRMIAARD
EERKSSKKRRADKLRTVERSKEPSIRSKLDEGGRQHRRIEERSLRREEDLRGRGEAVGRY
GRDEYVPKRF
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgcacttgaatgtcgaacccacaccaagaaatcaccataatcaaacagtaccctcttcg
atggaaggcggatcaaaatccagcagtgctggccccagccaggccgaatccctcactcct
gagagggctagcaagctttacaaaagattctttaatgtatggaaacagcgagcggtgagg
atccgcgacgaccatttccaccggatggaacatccttctaggttagaaaggcgaccaacc
gtcaataatcgagtaattgcattggcaagtaactctgtggggtcacttgcgacatgggcg
aggacagacggaagtattactgtaatgaacgtcgcaacagaaagatacagttttacgatt
aaggaagcgcaaggtgtaggaaagttatgtctgtcgattgcatggaatccagtagaagcc
gaccagtttgtcactgttggcacttcgacatctgttaaactgtggaacgcttcggatagt
aaaaacccattattaaaaactctagtcactgggtcaagaattaagaactataaatgctta
tttgatcccctagggcagtggttgctcgttctgacgaaggctagtgaaatctacttgtat
gctgctaccgaaggctaccgattgcactcgatatccaagattcaacctgaacatgaagct
ggcgcggggagttgtgatactgtggagtcagtggcgtggctaaatgatggccagcatatt
atactaggttttaagcttgggtctataaaaatatttaaactgggagatgctgggtttgaa
attcggaatacaatgtttggtcatttgaaaaccataacttcgcttgcagttgatccatgg
ggtctttattttgtcgcaggctctgaggatggctcctgttctctttggtcgctcaaagat
tttacatgcaaaacagtacattccgagcctgagggtgtcgtagagagcgtgagcatttca
gatgacggatttgttttggcagtgggatcacggatgtcatctagagagcagagtaagttc
tcatttcgttcacttctaggtcaggagaacatgtatgagatttccttcaatagcaatgcc
aattcgctagtgcactttatcccagagaccatgaaagtactctttacggaggaaagagat
atcgtcacaatactaaagtcaacctgcagttcaatattatataccagcgaagagtcggag
aagatggaagcgggtttggctgccacatccaacgttaagaggatgattgctgccagggat
gaagagcgtaagtcatccaagaagcgcagagcagataaactgaggacggtggaaaggagt
aaggaacctagcatacgaagcaagctggatgagggtggccggcagcaccgtcggatagaa
gaaagatctcttcggagagaagaagacttgcgcggccgcggggaagcagtcgggcgctac
ggacgtgatgagtatgtaccaaagaggttttag

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