Ashbya gossypii (Eremothecium gossypii): AGOS_AGL004C
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Entry
AGOS_AGL004C CDS
T00167
Name
(RefSeq) AGL004Cp
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ago
Ashbya gossypii (Eremothecium gossypii)
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ago03009
]
AGOS_AGL004C
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGOS_AGL004C
Ribosome biogenesis [BR:
ago03009
]
Eukaryotic type
Pre-60S particles
Helicases
AGOS_AGL004C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
4622961
NCBI-ProteinID:
NP_986662
UniProt:
Q750F8
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All DBs
Position
VII:complement(1032636..1034564)
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AA seq
642 aa
AA seq
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MSFLDFCFLFVAMSKNSSERLQSSHRQQDLNSNSRLQETQAFIMSKSLSWDTLDYTLQPW
IRTAVDAMGYETMTPVQASTIPLFARNKDVVVESVTGSGKTVAFVIPVLERVIQDDANSS
KLKKGHFHTIIISPTRELASQIQGVIEAFLTYYPDGEYPIKSQLLIGSNTSSVRDDVAAF
LEHRPQILVGTPGRLLDFLKMPNIKTSSCGAAILDEADKLLDMNFEKDVETILKMLPKQR
RTGLFSATVSSAGTQVFKTGMRNPVKVSVKTSNKAPSSLDINYIVIEPRMKLQLLLTLLN
NYRYKKCIVYLPTCIAVTYFYSILQHLAKLNKMDENLKLYSLHGKLLTNSRMKTLDRFTQ
ELGKAVLLTTDVAARGIDIPDIDLVLQMDPPIDADIFLHRCGRAGRANRAGRAIVFLNQG
REEDYIPFLQVKNVEAKELDTVAIKPIEGLPEIIRAWILEDRARFDHSLKVYVAFLRYYS
KHTASSIFRLQTLDYIGIAEMHGLIRLPGTPEIQRYLSKDAIPEDGWLVSPPIDLDSFAY
ADPQREKARKLAKKEAKDVKDNNKLKSEMRKNNEAWSKKTVTKENKLQRKEKMALKRKAI
EEKLIENSDDSDNEVETDWKDIVRQRKKKKTNSGMQGDFGDL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctcgatttttgttttcttttcgttgcgatgtcaaaaaattcgagtgaacga
cttcagtcgtctcatcgccagcaagatcttaatagcaatagtcgactacaggaaacacaa
gctttcataatgtcgaaatctttatcatgggatacactagactatactctacaaccatgg
attcgtactgctgttgatgccatgggttatgagaccatgacacctgtacaggcatcgacg
atcccgctatttgccagaaacaaagatgtggttgtagaatctgtgaccggttcggggaag
accgtggcatttgtcatacctgtattggagagagtgatacaggatgatgccaatagttca
aagctcaaaaaaggccacttccacaccataataatctcccctacgcgggagcttgcatca
cagatacagggcgtgattgaagcgtttctgacatactatccagatggagaatatcctata
aaatcacagttgcttatcggtagcaataccagtagtgtcagagatgatgttgcagcgttt
ttggaacatagaccgcaaattttagttggtacgcctggaaggctattagactttcttaag
atgccaaacatcaagacgtcttcatgtggcgcagctatccttgatgaggccgacaagtta
ttggatatgaattttgagaaggatgtcgagacaatactgaagatgctacccaagcaaagg
agaactggcttattttctgcaacggtcagtagtgcgggaactcaagtgttcaagacagga
atgagaaatccggtaaaggtatctgtaaagacaagtaataaggcgccctcgtctctggat
atcaactatattgttatcgaacctagaatgaagttacagcttttattgaccctgttgaac
aattacagatacaagaagtgcatcgtttacctccccacctgcattgcggtcacgtatttc
tattctatcttgcagcatttggcgaagcttaacaagatggacgaaaaccttaaactatat
tcgctacatggtaagctgctgaccaattcaaggatgaagaccctagacaggtttactcag
gagttgggcaaagctgtgctactaaccactgatgtggctgcgagaggtatcgatatcccg
gatattgatttagtcttgcaaatggatccgccaatcgatgctgacatctttttgcacaga
tgtggtcgtgctggaagggcaaatagagctggcagagctatagtattcctcaaccagggg
agggaggaagattatattcccttcttgcaggtaaaaaatgtggaagccaaagaacttgat
actgtcgcaattaagccaatcgagggactacctgagattattagagcttggatattagag
gatcgtgcacggtttgatcatagcttgaaggtatacgtcgccttcttgagatattattcg
aaacatactgcgtcttcgatatttagattgcaaaccctggactacattggaattgcggaa
atgcatggcctaattcgtctaccgggtaccccagaaatacaaagatacttgtcgaaggat
gcgattccagaggatggatggctggtatcaccaccgattgaccttgattcgtttgcatac
gcggaccctcagagggaaaaggcccgaaaactagcgaagaaagaagccaaggatgtgaag
gataataacaaattgaaaagtgaaatgcggaagaacaatgaagcttggtccaagaagacg
gtcaccaaggaaaataaacttcagcggaaggagaagatggctctaaagaggaaggcgata
gaggaaaaactgatagagaatagcgatgacagcgacaatgaagtcgaaacggactggaaa
gacatcgtgaggcagcgcaagaagaagaaaactaacagcgggatgcagggcgactttgga
gatctatag
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