Affinirhizobium gouqiense: QTJ18_14120
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Entry
QTJ18_14120 CDS
T11881
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
agou Affinirhizobium gouqiense
Pathway
agou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QTJ18_14120 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agou03400
]
QTJ18_14120 (uvrB)
DNA repair and recombination proteins [BR:
agou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QTJ18_14120 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QTJ18_14120 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
SWI2_SNF2
Microtub_bd
DUF2963
Motif
Other DBs
NCBI-ProteinID:
WKC25121
LinkDB
All DBs
Position
1201335..1204394
Genome browser
AA seq
1019 aa
AA seq
DB search
MSKAPKKSPPNNASNGFEEAPQRALEGAPLSGSVADWLQQLEAEAEASSVETQREIASKA
GKHRKKIEIAAREAAIREAKEEEAARAKRSAPAGKAGTAKNTTASKTSRGVSIGASSDPK
TRAAAGLNPVAGMDMSLEEAKTLSPSLAPGAVTATVDALAKLIESGNPLFKDGKLWTPHR
PARPEKSEGGITIRMASDYQPAGDQPTAIADLVEGISSGERSQVLLGVTGSGKTFTMAKV
IEATQRPAVILAPNKTLAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKE
SSINEQIDRMRHAATRAILERDDCIIVASVSCIYGIGSVETYTAMTFQMQVGDRIDQRQL
LADLVAQQYKRQDINFVRGSFRVRGDTIELFPAHLEDAAWRISLFGDEIDSITEFDPLTG
HKTGDLKSVKIYANSHYVTPRPTLNGAIRAIKDELKHRLAELEQAGRLLEAQRLEQRTRY
DIEMMEATGSCNGIENYSRYLTGRRPGEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYR
GDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTVAVSATPGGWEMDQAGGVFAEQV
IRPTGLIDPPVEVRSARSQVDDVLGEIRETALKGYRTLCTVLTKRMAEDLTEYLHEQGVR
VRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSE
TSLIQTIGRAARNVDGKVILYADNITGSMKRAMEETARRREKQMAYNIEHGITPESVKAR
ISDILDSVYERDHVRADISGASGKGFADGGHLVGNNLQTHLNALEKEMRNAAADLDFEKA
ARLRDEIKRLKAVELASMDDPIAREESKAQEGVRRSAEATRQSLDQSPGEQLAKRGGKGA
SPQDAQASYFAKPSLDDMGPGTDTAIPSAPGQTGAPLFRKNTLDEMTVGRTEKPVPGRLP
EKPSAASAGDDGRKSVKAAQTESDPRPLVRGKTGIGSYEDPAELKRKGRTKGKTGRPGR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagctccgaaaaagtctccgccaaacaacgccagcaacggtttcgaggaagcg
ccgcagcgtgccctggagggcgcaccgctttccggctcggtcgccgattggctgcagcag
ctggaagcggaggcggaagcctcctccgtcgagacccagcgcgagatcgcctccaaggca
ggcaagcatcgcaagaagatcgagatcgcggcccgggaagcggcgatccgcgaggccaag
gaagaggaggcggccagagccaagcgcagcgccccggcggggaaagccggcacagccaag
aacaccaccgcctccaagacctcccgcggcgtctcgatcggtgcctcctccgatccgaag
acccgcgccgccgccggcctcaatccggtcgccggcatggatatgtcgctggaagaggcg
aagacgctatccccatctctcgcccccggcgcggtcaccgccacagtcgatgcactggcg
aagctgatcgaaagcggcaatccgctgttcaaggacggcaagctctggacgccgcaccgc
cccgcgcggccggaaaagtccgagggcgggatcacgatccgcatggcctccgactaccag
cctgccggcgaccagccgaccgccatcgccgatctggtggaggggatcagctccggcgag
cggtcgcaggtgctgcttggcgtcaccggctccggcaagaccttcaccatggccaaggtg
atcgaggcgacacagcggcccgccgtcatcctcgcgccgaacaagacgctggcggcgcag
ctctattccgaattcaagaatttctttcccgacaatgcggtggaatatttcgtttcctac
tacgattattaccagccggaagcctatgtgccccgctcggatacctatatcgagaaggaa
agctcgatcaatgagcagatcgaccgcatgcgccatgcggcgacgcgtgccattctcgaa
cgcgacgactgcatcatcgttgcctccgtctcctgcatctatggtatcggctcggtcgaa
acctatacggccatgacattccagatgcaggtgggcgaccgcatcgaccagcgccagctg
ctcgccgacctcgtggcgcagcaatacaagcgacaggacattaacttcgtgcgcggctcc
ttccgcgtgcgcggcgatacgatcgagctctttcccgctcacctggaggatgccgcctgg
cgcatttcgctgttcggcgacgagatcgattccatcacggaattcgatcccctcaccggc
cacaagaccggcgacctcaaatccgtaaagatctacgccaattcgcattatgtgacgccg
cgcccgacgctgaacggcgcgatccgggcgatcaaggacgagctgaagcatcgcctggcg
gaactggaacaggccgggcgcctcctggaggcgcagcgcctggagcagcgcacccgctac
gatatcgagatgatggaggcgacgggctcctgcaacggcatcgaaaactactcacgctat
ctgaccggccgccggcccggcgaaccgccgccgacactgttcgagtatatccccgacaat
gcgctgatcttcatcgacgagagccacgtcaccatcccgcagatcggcggcatgtatcgc
ggcgacttccggcgtaaggccacgcttgcggaatacggcttccgcctgccctcctgcatg
gacaaccggccgctgcgcttcgaggaatgggatgccatgcggccgcagaccgttgccgtc
tccgccacgcccggcggctgggagatggaccaggccggcggcgtcttcgccgagcaggtc
atccgcccgacgggccttatcgatccgccggtggaggtgcgttcggcgcgcagccaggtg
gatgacgttctgggcgagatccgcgagacggcgctgaaagggtaccgtacgctgtgcact
gtgctgaccaagcgcatggccgaggatctcaccgaatatctgcatgaacagggcgtgcgc
gtccgttacatgcattccgacatcgatacgctggagcgcatcgagatcatccgcgatctt
cgtctgggtgctttcgacgtcctggtgggcatcaacctgctgcgcgaaggtctcgatatc
cccgaatgcggcttcgtcgccattctggacgccgacaaggagggattcctgcggtcggaa
acctcgctcatccagacaatcggccgcgcggcccgcaatgtcgacggcaaggtcatcctc
tatgccgacaacatcaccggctcgatgaaacgggccatggaagagaccgcccggcgccgc
gaaaagcagatggcctataatatcgagcacggcatcacgccggaatcggtcaaggcccgg
atttccgatattctcgacagcgtctatgagcgcgatcatgtccgcgccgatatttccggt
gcctccggcaagggcttcgccgatggcggccatctggtgggcaataatctccagacgcat
ctcaacgcgctggagaaggagatgcgcaatgccgccgccgacctcgatttcgaaaaggcc
gcccgtctgcgcgacgagatcaagcgcctgaaggccgtcgaactggccagcatggatgat
ccgatcgcccgcgaggagagcaaggcccaggaaggcgtgcgccgcagcgccgaggccacg
cgccaatcgctggaccagtcgccgggtgagcaactggcgaagcgtggcggaaagggagcc
tcaccccaggatgcgcaggcctcttatttcgccaagccctcgcttgacgatatgggaccg
ggcaccgatacggccatcccctccgccccgggccagaccggggcgccgctgttccgcaag
aacacgctggacgaaatgactgtcggccgcaccgaaaagcccgtgcccggcaggctgccg
gaaaaaccgagcgcagcctccgccggcgacgacggcaggaagagcgtgaaggctgcgcag
acggagagcgacccccgcccgctggtgcgcggcaaaaccggcatcggctcctatgaggat
ccggcagagctgaagcgcaagggccgcacgaagggcaagacggggagacccgggcgctag
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