Affinirhizobium gouqiense: QTJ18_19960
Help
Entry
QTJ18_19960 CDS
T11881
Name
(GenBank) translocation/assembly module TamB domain-containing protein
Organism
agou Affinirhizobium gouqiense
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TamB
TamB_N
Motif
Other DBs
NCBI-ProteinID:
WKC23084
LinkDB
All DBs
Position
2431974..2438072
Genome browser
AA seq
2032 aa
AA seq
DB search
MSSSSRLTTGIIRIAVAAVALLLVVVTAVVLFFGFVPAGSQLAGRMLSNFLSTPERQIAI
NGTRGLLTGNLHIDEVALSDTEGVYARAQNILVDWSPLSLLTGTFRADNIKLDQLSIARA
PLAVEPPVTQTSSGSSSGFSLPVAVVINSFQLPDIELGANLTGRPFQLSAEGSADATDER
VALQLSARRKDAPNAIAKTDLVFAPNQNELKLQALVSEPQGGLLARLLHLPGAPSVALAM
DGRGPLSNWTGALRGTVAGKPVISVDGGHQLTPEGAHSIHIEGGGQLAELLPPAIKPLFA
ERTDIMVTANVAESGRIEIKNGTLTNGAMKLSAAGAVDPSGDNSLTGSLAAANGPVEIQW
PLGGAPARISLDKLNFTLTGPAEASRFNATAALSTLSASGATFRQVRLQAESEDLNMVTT
AGSIRTRLTAATADFDEPNLDRLIDGPIRLDAPIRLEMPAIGLDAATFESANISGTVSGA
FNQSKQTLMGNVRVSLNPNGLPEAAGRYFSDTIGLEGYVDSVIGGRMSLENVVLKSSLID
GHGNIIFDKGRLDGELAGRLADIGRLRKDAKGPVGYDMSFSGPPEALALKAVLNAAELRL
SGHLLQAVTTDITGATGPEGLSGNVALAGSIDGKPLRLQTAINQKDGRITLPDLDLNVGE
NQVSGALSLSDNYLPAGELNFQLPDIALLATLAGQQASGDLQGTVSLANDGGVLASKITA
TGQALTAQGVTLRAPAIDLASANVMNLQAQGTVKADTFSIGNQTLSGLTLGLTQEANRTS
FDLSAAYSNAPLVLAGTLDRNPDASDMALTIERFSAVPQGVPVELTEPARIAISGNTLQF
NAIRLTAGGGQIVMEGGSGDQLNLAIRINALPATIANSFVPQLAAGGAIGGVVTVQGTLA
SPSLRYGLNWDAAAIAQTRSLGLAPATITARGRFEAGTVTVESAGVDVEDQVSATANGTI
TLAEPGRLDLTVDLSKLSAGLANALRPDLAAEGDVRGTAQVTGSFAAPQARFSLALTNAS
IAPTRDAEIGPLSATLEGGFADNAIAVDALRISGANGISAEAAGTVSLAGERQLRMEARI
NALPAALIDIAKADLGAQGVLSGQALVEGTLSRPQAGFTLNWADGSLAQTRAAGLTGLSA
EIQGRFAEQTVTLDRGSLTGPQGLSLTASGSAGLAAGAPLAISAEFAQLPASLANVARPD
LDARGLLRGSINATGTLAAPSVGYDVQLADGSTAQTRQAGASAIEARMRGSFADGLVTLE
ETRLTDPSGLSVTATGNIRLRQDQAPLVNVNASIAALPANLANAFVPDLQAGGMISGTVS
SSGTPDAPVTQFDLTWRDAKLRQTLSAGLAGLEVQAKGSLDNAVLTLQQASLSGPSGLSA
KAQGTIGMAENRALNLTAELSSVPADLANSFLPGIEAGGMISGTASVSGTLSAPAAEYDL
RWSQGVIRRQGDSGIGGLNLKTAGRFENGRLTLRDTALTGPEGLSVTAAGSVSFAGDVPQ
LDLNADINALPARLADAFQPGLGATGTISGRISSLQGSGPGGAFDLTWSGASVAQTRTAG
LAPFNIVAEGSVTPQRLQVETRLSGASGLSVTGGGTVGLAGGFPLDLRVQGNLPFALAAA
PLASQGFLLQGNGNVNVAIGGTASAPAVTGTATTSGARLIDVRRNLALNNLTANITFNRD
TATLSAASAAISTGGRVSVQGTIGLRDGYAADLRIALDNAVYVDGDLVTAKVNGGLTVSG
PLLGGLTIGGAVTLVRADITVPATLPSSLAEIDVKHVNAPADVRALLQTLGPQGGGDGTS
TGINLDLTLNAPNGIFVRGRGIDAELGGALTIRGNTTAPIVIGAFDLRRGRIVILTKRLD
FTEGRITFGGSLVPVIDFTATTSSGQTTITVNVTGQANNPDISFGSSPALPQDEILAQLI
FGQSLSRLSALQIAQLADAVSQLAGGGDTSLLQSLRASLGIDDLDIQTDESGQTSVSIGR
RLNNRTYLQLEQGGSDGGTRATINLDIGRGLKLKGSAGTEGGSAGIFYEKEY
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctcatcccgcctgacgacagggatcattcgcattgcggttgccgcggtggcg
cttctgcttgtcgtggtgactgcggttgtgctgtttttcggctttgtcccggccggcagc
cagctcgccggccgcatgctcagcaatttcctgtccacgcccgagcgacagatcgccatc
aatggcacgcgggggctgctgacaggcaatctgcatatcgatgaggtcgccctttccgac
accgaaggcgtctatgcaagggcacaaaacatcctggtggactggtcgcccctgtcactt
ctgacgggcactttccgcgccgacaacatcaagctggaccagctttcgatcgcccgcgcc
ccgcttgccgtcgaaccgcccgtgacgcagacttcctccggttcctccagcggcttttcc
cttcccgtcgcggtggtgatcaactccttccagctgcccgatatcgagctcggcgccaac
ctcacgggccgcccgttccagctttcggcggaaggttctgccgatgccacggatgagcgt
gtggccttgcagctctcggcgcggcgcaaggatgcccccaatgcgatcgccaagaccgat
cttgtctttgctccgaaccagaacgaactgaagctgcaggccctggtctccgagccgcag
ggcggccttcttgcccgtctgctgcatcttccgggcgcaccgtccgtggctctcgccatg
gatggccgcggcccgctgtccaattggacaggtgccttgcgcggaaccgtcgccggcaag
ccggtgatcagcgtggatggcggacatcaactcacaccggaaggcgcgcacagcattcac
atcgaaggcggtggccagctggcggagctgctgccccctgccatcaagcctctctttgcc
gaacgcacggatatcatggtgacggccaatgtcgccgaaagcgggcgcatcgagatcaag
aacggcaccctgaccaatggtgcgatgaagctctcggccgcaggggcggtggatccgtcc
ggcgacaacagcctgacgggaagccttgccgccgccaatggtccggtcgagatccagtgg
ccgctcggcggcgctccagcccgcatttcgctcgacaagctgaacttcaccctcaccggt
ccggcagaggcatcgcgcttcaatgccaccgcggcgcttagcaccctctccgcttccggc
gccaccttccgtcaggtccgcctgcaggcggaaagcgaagacctcaacatggtcaccacg
gccggcagcatccggacgcggctgacggctgccaccgccgatttcgacgaacccaatctc
gacaggctgatcgacgggccgatccgcctcgatgcaccgatccggctggaaatgccggcg
attggcctggatgccgcgaccttcgaaagcgccaacatatccggcacggtgtcgggcgca
ttcaaccagagcaagcagacactgatggggaatgtgcgcgtctcgctcaatcccaatggc
ctgcccgaggccgcggggcgctatttcagcgatacgatcggcctggaaggctatgtggac
agcgtcatcggcggccggatgagcctcgaaaacgtcgttctcaagtcaagcctcatcgac
ggccacggcaatatcatcttcgacaagggccggctcgacggcgaactggcaggccgactg
gccgatatcggtcgcttgcgcaaggatgccaagggaccggtcggctatgatatgagcttt
agcggcccgccggaagcgcttgcattgaaggcggttctcaatgccgccgagctgaggctg
agcggtcatctgctgcaggccgtgaccaccgatatcaccggcgcaaccggtccggaaggg
ctgagcggcaacgtcgccctggccggctctatcgacggaaagccgcttcgactgcaaacg
gccatcaatcagaaggacgggcgcatcacgctgcctgatctcgacctgaatgtcggcgag
aaccaggtcagcggcgcgctcagcctttcggataattatctgccggccggagaattgaac
ttccagctgccggacatcgcgcttctggcgacccttgccggacagcaggcaagcggcgac
ctgcagggcacggtatcgctggccaatgatggtggcgtgctggcctcgaaaatcacggcg
accggccaggctctgaccgcccagggcgtcacgctgcgggcgccggctatcgaccttgca
agcgccaatgtgatgaacctgcaggcgcagggcacggtgaaggccgataccttctcgatc
ggcaaccagaccctgtccggcctgacgctcggcctgacgcaggaggccaaccgcaccagt
ttcgatctctccgccgcctattccaatgcgccgctggttctggcaggaacgctggaccgc
aatcccgatgccagcgacatggcgctgacgatcgagcggttctccgccgtgccgcagggc
gtgccggttgagctgacggagccggcgcgcatcgcgatcagcggcaatacgctgcaattc
aacgcgatccgcctgaccgccggcggcggccagatcgtgatggagggcggctccggcgac
cagctgaacctcgctatccgcatcaatgcgcttcctgcgaccattgccaacagctttgtc
ccgcaactggccgccggcggtgcgatcggcggcgtcgtgacggtgcaaggcacgctcgcc
agtcccagccttcgctacggcttgaactgggatgcggcggcgatcgcccagacgcgatcg
cttgggcttgcccccgcgacgatcacggcgcgcggacgtttcgaggcgggaacggtgacc
gtggaaagcgccggggtggatgtcgaggaccaggtttccgccacggccaatggcacgatc
acgctcgcggagcccgggcggctggacttgaccgtcgatctttcaaaactttcggccggc
ctcgccaatgccctgcggcccgatcttgccgccgagggcgatgtgcgcggcacggcgcag
gtcaccggcagttttgcagcaccacaggcgcgcttttcactggcgctgacgaacgcatcc
atcgcgccgacgcgtgatgccgaaatcggcccgctttcggcaacactcgagggtggtttc
gctgacaatgccatcgctgtcgatgcgctgcgcatcagcggcgcgaacggcatttccgcc
gaggcggcaggaaccgtatcgctggccggcgagcggcagctgcgcatggaggccaggatc
aatgccctgccggcggcgctgatcgacattgccaaggcggatctgggcgcgcagggcgtt
ctgtccggccaggcgctggtcgaaggaacgctttcccggccgcaggcaggcttcacgctg
aactgggccgatggttcgctggcccagacccgcgccgcaggcctgaccggcctttcagcc
gagatccagggtcgttttgccgaacagaccgtgacactcgatcggggcagcctgaccgga
ccgcagggcctcagcctgacggcctccggctccgccggcctggcagcaggcgcgcctctc
gctatcagtgccgaattcgcacagctgccggcctcgctcgccaatgtggcgcggccggac
ctcgatgcccgcggcctgcttcgcggttccatcaacgcgacaggcacgctggcagccccc
tccgtcggctatgatgttcaactggcagatggttcgacggcgcagacccgccaggccggc
gcctcggccatcgaggcgcgcatgcgaggaagtttcgcggacgggctggtcacgctggaa
gagacacgcctgacggatccttcgggtctgtcggtcactgccacgggcaatattcgcctg
cgccaggaccaggctccgctcgtgaatgtcaatgccagcattgccgctcttccggccaat
ctcgccaatgcctttgtaccggacctgcaggccggcgggatgatctccggaacggtttcc
tcctccggcacgccggacgcgccggtgacgcaattcgatctcacctggcgcgatgccaag
ctgcgccagaccctttccgccggactcgccggtcttgaagtgcaggcgaaaggctcgctg
gacaatgcagtcctcaccctgcagcaggcaagcctcagcggtccatccggcctgtccgca
aaagcgcaagggacaatcggaatggcggagaaccgcgcactcaacctgactgcggaacta
tcctcggtgcccgccgatcttgccaacagcttcctgcccggcatcgaggccggtggcatg
atctcgggcacagcgagcgttagcggaaccctgtctgccccggccgccgaatatgacctg
cgctggtcgcaaggggtgatccggcgccagggcgattccggcattggcgggctgaacctg
aagaccgccggccgtttcgagaatggccggctgacgctgcgcgacaccgcgctgaccggt
ccggaggggctctcggtgacggcggcggggagtgtctccttcgccggcgacgtgccgcag
ctggatctgaacgccgacatcaacgccctgccggcccggctcgccgacgccttccaaccc
ggtctcggcgcgaccggcacgatctccggacgcatctcctccctgcaaggctccggtccg
ggcggcgccttcgacctcacctggagcggcgcctcggtagcccagaccagaaccgcgggc
ctggcgcctttcaatatcgttgccgagggcagcgtcacaccgcagcgcctgcaggtcgag
acccgcctgtccggagcgagcggactgagcgtgacgggcggcggaacggtgggactggcc
ggcggctttccgctcgatctgcgggttcagggcaatctccccttcgcccttgcggccgcg
ccgctggcaagccagggctttctacttcaaggcaatggcaatgtgaatgtcgcgatcggc
ggaaccgcatcggcgccggcagtcaccgggacggcgacgacgagcggcgcaaggctgatc
gatgtcaggcgcaatctcgcgctgaacaatctgaccgccaacattaccttcaaccgcgat
accgccacgctgtctgccgcctccgccgccatttccaccggcggccgggtctccgtgcag
ggcacgatcgggctgcgggacggctatgccgccgatcttcgcatcgccctcgacaatgcc
gtttacgtggatggcgacctggtcacggccaaggtcaatggcgggctgaccgtgtccggc
ccgcttctcggcggcctgacgatcggtggcgcggtcaccctcgtccgcgccgatatcacc
gttccggcgacgcttccgtcctcgctcgccgagatcgacgtcaaacacgtcaatgccccc
gccgatgtgcgcgcgcttttgcagacgctcggcccgcagggcggcggcgacggaaccagc
acgggcatcaacctggatctaacgctgaatgcgccgaacggcatctttgtccgcggccgc
ggcatcgatgcggaactgggcggcgccctgaccattcgtggcaataccaccgcgccgatc
gtgatcggcgctttcgacctcaggcggggcaggatcgtgatcctgaccaaacggctggac
tttaccgaaggccgcatcaccttcggcggcagcctggtgccggtgatcgattttaccgcc
acaacaagttcgggccagaccacgattaccgtcaacgtcacgggccaggcaaacaatccc
gatatctccttcggctcgtctccggccctgccccaggacgagatcctggcccagttgatc
ttcgggcagtcgctgtcgcgcctctcagccctgcagatcgcccagttggcggatgctgtc
agccagcttgccggcggcggcgatacctcgctcctgcaatcgctgcgagcatcgctcggc
attgacgacctcgacatccagaccgatgaaagcggccagaccagcgtgtccatcggccgg
cgcctgaacaaccgcacctatctgcagctggaacagggcggcagcgatggcggaacccgc
gcaaccatcaatctcgatatcggccggggcctgaagctcaaaggatccgcgggaacggaa
ggcggctctgccggcatcttctacgaaaaggaatattag
DBGET
integrated database retrieval system
