KEGG   Affinirhizobium gouqiense: QTJ18_21695
Entry
QTJ18_21695       CDS       T11881                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
agou  Affinirhizobium gouqiense
Pathway
agou03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:agou00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QTJ18_21695 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agou03021]
    QTJ18_21695 (rho)
   03019 Messenger RNA biogenesis [BR:agou03019]
    QTJ18_21695 (rho)
Transcription machinery [BR:agou03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     QTJ18_21695 (rho)
Messenger RNA biogenesis [BR:agou03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     QTJ18_21695 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 NACHT DUF6360 AAA
Other DBs
NCBI-ProteinID: WKC23393
LinkDB
Position
complement(2826690..2827955)
AA seq 421 aa
MAEMKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKVLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELDVPTSKDLSARVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNGDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaagaactcaagagcaagtcgcccaccgacctgctgaccttc
gctgaatccctggaggtcgaaaacgcgagcacaatgcgcaagcaggaactgatgttcgcg
atcctgaaggttctcgccagccaggatgtcgaaatcattggtgaaggcgtcgtggaagtg
ctgcaggatggcttcggcttcctgcgttcggccaatgccaattacctgcccggcccggac
gatatctacatttcgccctcgcagatccgtcggttttcgctgaagaccggcgatacggtg
gaggggccgatccgtggtccgaaagaaggtgagcgctatttcgctctcttgaaggtcaac
acgatcaatttcgacgatccggaaaagatccgccacaaggttcacttcgacaatctgacg
ccgctctatcccaatgagcgcttcaagatggaactggatgttccgacatccaaggacctc
tccgcccgggtcatcgacctggtggcgccgcttggaaagggacagcgcggcctgatcgtc
gcgccaccgcgcactggtaagacggtcctattgcagaacatcgcccactcgatcactgcc
aaccatcctgaatgctacctgatcgttcttctgatcgacgagcgtccggaagaagtcacc
gatatgcagcgctccgtacggggtgaagtcgtctcctcgaccttcgacgaaccggctgtc
cgtcacgttcaggtggcggaaatggtcatcgaaaaagccaagcgcctggtcgaacatggg
cgggatgtggtgatcctgctggactcgatcacccgtcttggccgcgcctataacaccgtc
gtgccttcatccggcaaggtcctgaccggtggtgtcgatgccaatgccctgcagcgtccg
aagcgcttctttggtgcggctcgtaacatcgaagaaggcggctctctgacaatcattgcc
acagctctgatcgataccggcagccgcatggatgaagtcatcttcgaagagtttaagggc
accggcaactcggaaatcgtgctggatcgcaaggtcgccgacaagcgcatcttcccggcc
atggatatcctcaaatccggtacccgcaaggaagaccttcttgttccgcggcaggatctg
cagaagattttcgtcctgcgccgcattcttgccccgatgggaaccaccgatgcgatagag
ttcctgatcgacaagttgaagcagacgaagaacaatggcgacttcttcgactcgatgaac
acgtaa

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