Actinobacillus genomosp. 1: NYR63_00920
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Entry
NYR63_00920 CDS
T09109
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
agp
Actinobacillus genomosp. 1
Pathway
agp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYR63_00920 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agp03019
]
NYR63_00920 (pcnB)
Enzymes [BR:
agp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NYR63_00920 (pcnB)
Messenger RNA biogenesis [BR:
agp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NYR63_00920 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
WGE91543
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Position
186982..188514
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AA seq
510 aa
AA seq
DB search
MFSRQKKSKKQPLAEQETLSAKQERKVKAVELQPKSKRPALAFNEQSERSTKKPKKHSDL
PSHLLHKKFTVNAGHYDITPKDFPKNALAIVEKLQRAGFEAYVVGGCIRDLLLGHKPKDF
DVATNAKPEEIQKIFGRQCRLIGRRFRLAHIVFGRDIYEVATFRADHASHNSDKISKVSE
EGMLLRDNVYGTLREDAQRRDFSVNSLYYDPKHNLIFDFFDGIADLKAGKLRLIGDPVVR
YQEDPVRMLRAVRFMAKLDMFLDKPSDTPIRELAHLLKNIPAARLFDESLKLFQSGQGFK
TYQLMRQYGLFEQLFPVLTPFFTERNDSNAERMLSKALNSTDDRIRDNLRVNPAFLFAAL
LWYPLREKMEMLKNEGGLNSHDAMMLAANDVLAESCKAIALHRRHTSVIRDIWALQFQMT
KRSGKRPQQTLEHVKFRAGFDLLVMRAEIEGGDLVELSAWWHEYQFSNDAQRAEMLKAVR
NVPNFAGEEKKKRRRKTFRKKKPAKKATAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctcgacaaaaaaaatcaaaaaaacaaccgcttgccgaacaagaaacgcttagt
gctaagcaagaaagaaaagttaaagcggtagaattacaacctaaatccaagcgtcccgct
ctggcttttaacgaacagtcggaacgttctacgaagaaaccgaaaaagcactcggatctt
ccttcccatttattgcacaaaaaatttacagtaaatgccggacattatgatattacgccg
aaagatttccctaaaaatgcgttagcgattgttgaaaaattacaacgtgccggttttgaa
gcttatgtggtcggcggctgtattcgagatttattgctagggcataagccgaaagatttt
gatgttgcgaccaatgcaaaaccggaagagattcagaaaatcttcggtcgccaatgccgt
ttaatcggacgccgttttcgtttggcacatatcgtattcggacgtgatatttacgaagtg
gcgaccttccgtgccgatcacgccagccataacagcgataagatttctaaagtaagcgaa
gaaggaatgttgttgcgcgataatgtgtacggtaccttacgcgaagatgcgcaacgccgt
gattttagcgtgaattcgctctattatgatccgaaacataacttgattttcgatttcttc
gacggtattgcggatctgaaagcgggaaaactgcgtttaatcggtgatccggtggtgcgt
tatcaagaagatccggtacgaatgttacgcgcggttcgttttatggcgaaattggatatg
tttttagataaaccgagcgatacgccgattcgtgaattggcgcatttattgaaaaacatt
ccggcggcgcgtttatttgacgaatcgttgaaattatttcaatcgggacaaggttttaaa
acctatcaattaatgcgtcaatacggcttattcgagcagttatttccagtacttacgccg
ttttttaccgaacgtaacgattcgaatgcggagcgtatgttaagtaaagcgctgaattcg
accgatgatcgtattcgtgataatttacgggtgaatccggcgtttttattcgccgctctt
ctttggtatccgttacgtgagaaaatggaaatgctgaaaaacgaaggcggcttaaatagt
catgatgcgatgatgctggcggcgaatgacgtgttagccgaaagttgtaaagcgattgca
ttacatcgccgtcatacctctgtgattcgtgatatttgggcgttacagttccaaatgacc
aaacgttcgggcaaacgcccgcaacagaccttagaacacgtaaaattccgtgcgggtttc
gatttgttagtgatgcgtgccgagattgaaggcggcgatttagtcgagctttccgcttgg
tggcacgaatatcaattcagtaatgacgcacaacgtgcggaaatgctaaaagcggtcaga
aatgtgccgaattttgcaggcgaagaaaagaaaaagcgtcgccgtaaaacatttagaaag
aaaaagccggcgaagaaagctacggctgaataa
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