Actinobacillus genomosp. 1: NYR63_03195
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Entry
NYR63_03195 CDS
T09109
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
agp
Actinobacillus genomosp. 1
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agp03016
]
NYR63_03195 (rnd)
Enzymes [BR:
agp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NYR63_03195 (rnd)
Transfer RNA biogenesis [BR:
agp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NYR63_03195 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
WGE91972
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All DBs
Position
689378..690493
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AA seq
371 aa
AA seq
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MNQIIHYNWIDTNEQLKSVCDNACHKSAVALDTEFIRTRSYYPKLGLIQLFDGDTVSLID
PNTISDFSPFIRLLSCENVVKVLHACSEDLEVFQHQFNQLPTPLADTQTMAGFAGIGVSL
GFAKLVAHYLNIELDKGASRTDWLARPLTEEQLQYAAADVWYLLPVYQRLVADLDVTRWQ
NAVEQECQNLLDKRKASVDVTSAYKDISNAWRLEPQQLAVLQILAKWRIAEAEKRDLALN
FVVKENCLFEIAKLQPKHTSQLLEFMHPNEVRIHGKKLLMLVEQGVSVLPENYPKKIIRL
VDQANYKYKLKAMQQKLAEIQPLDLAPELLANKRQLNQLFSWHQKGQDPEKLPELLIGWR
RAFGLQILTVL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatcattcactataattggattgatacgaatgaacaattaaaatcggtttgt
gataatgcttgtcataaatcggcggtcgcattggataccgaatttattcgtacacgctca
tattatcctaaacttggtcttattcagctttttgacggagatacggtgagtttgattgat
cctaatactatctctgatttttctccgtttattcggttattgtcgtgtgagaatgttgtc
aaagttttacatgcttgtagtgaagatctagaagtcttccaacatcagtttaatcaatta
cctacgccgttggccgatacacaaacgatggcgggttttgcgggaatcggggtttcattg
ggctttgcgaaacttgtcgctcattatttaaatattgagttggacaaaggtgcgtctaga
acggattggcttgcccgtccattaacggaagaacaattacaatatgcggcggcagacgta
tggtatttattaccggtttatcaacgattggttgccgatttagacgtaacgcgttggcaa
aatgcggttgaacaagaatgtcagaatttattagataaaagaaaagctagcgtagatgtt
acttctgcatataaagatatttcaaacgcatggcgtttggaacctcagcaacttgcagta
ttacaaattttggcaaaatggcgcatcgcggaagcggaaaaacgcgatttagcattaaac
tttgttgtcaaagagaattgtttgtttgaaattgctaaattgcaaccgaaacatacttca
cagttattagaatttatgcatccgaatgaggtaagaattcatggtaaaaagttattaatg
ttggttgagcagggggtatccgtattaccggagaactaccctaagaaaattatacgtttg
gttgatcaagcgaactataaatataaattaaaggcaatgcagcaaaaattagctgaaatc
caaccgcttgatctagcacctgagttattagctaataaacggcaactaaatcagctgttc
agttggcatcaaaaagggcaagatccggaaaagttgccggaactgcttatcgggtggcgt
cgagcgttcggtttacaaattcttactgtcctatag
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