Actinobacillus genomosp. 1: NYR63_04395
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Entry
NYR63_04395 CDS
T09109
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
agp
Actinobacillus genomosp. 1
Pathway
agp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NYR63_04395 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agp03400
]
NYR63_04395 (xseA)
Enzymes [BR:
agp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NYR63_04395 (xseA)
DNA repair and recombination proteins [BR:
agp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NYR63_04395 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
CLZ
Motif
Other DBs
NCBI-ProteinID:
WGE92197
LinkDB
All DBs
Position
959323..960783
Genome browser
AA seq
486 aa
AA seq
DB search
MNNILTITQLNYSVRNLLEMELGQVWLTGEISNFSQPVSGHWYLTLKDENAQVRGAMFRM
KNQRVAFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG
LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI
VNTIDLANRRRECDVLIVGRGGGSLEDLWCFNEEAVAHTIFRSDIPIISAVGHETDVTIA
DFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWADKQAYFERLKLRLNA
KHPVRQVQMQQQRLAQFSYRLESAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQQQLQLK
QASYRLTQAIEQTLLRKQHQWKHITEQVKRNPLPHYVEKKTQQYAQLAQQLQFAIEKKLT
KEQQKFQELCTKIDGLSPLKILARGYSVTQTSQGEILRSTQNLEIGTQITTKLSQGEIVS
EIIKVN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatattcttaccatcacgcagcttaactattcggtacgcaatttacttgaaatg
gaattaggacaagtttggcttaccggtgaaatttccaattttagccaacccgtttccggt
cattggtatctcacccttaaagatgaaaatgcccaagtacgtggtgcaatgttcagaatg
aaaaaccaacgagtcgctttccgcccgcaaaacggtatgcaagtgctggtgcgtgctagc
gtcagtttatatgaaccgcgtggtgactatcagatcattattgaaagtatgcaacctgcc
ggtgacggcttattacaacaacagtttgaacagctaaaaatgaaactggccgccgaagga
ctttttgcacaagaaaagaaaaaagccattccgccttttgctaagcgagtcggtattatt
acctcttcaagcggtgcagcattacaggatattctgaatattttaaaacgtcgtgatccg
agcttggcgatcattatttatccgactctagtacaaggtaaagaagcgacacaagatatt
gtgaatacgattgatttagccaatcgtcgccgagaatgtgatgtgttaattgtcggccga
gggggtggttcgctagaggacttatggtgttttaacgaagaagctgttgctcacaccatt
ttccgttcggatattccgattattagtgcggtaggtcacgaaaccgatgtgacgattgct
gattttgtcgcagatttaagagcaccgacaccatccgccgcagcggaattagttagccga
gatcaacaagagttggttcgtcagttacagcatcaatttgacaaattaagtcttgctttt
gaccgcttatgggcggataaacaagcatatttcgaacgtttaaaactacgtttaaatgcg
aagcaccctgtccgccaagtacagatgcaacaacaacgattagcccaatttagttatcgt
ttagaaagtgcgatacataaaacttatttgaccgaaaagcaaaaactcgaacaattgttg
ctacgcttaaccaatcagcatccgcaacgccagttacaacagcaacaattgcaattaaaa
caagcaagctatcgtctaactcaagcgatagaacaaacattgctacgcaaacaacatcag
tggaaacatattaccgaacaagtgaagcgtaatcccttaccacattacgtagaaaagaaa
actcagcaatatgctcaacttgcacaacagctgcaatttgcgattgaaaagaaattaacc
aaagaacagcaaaaattccaagagctttgcacgaaaatagacggtttaagcccgctaaaa
attttagcgagaggctattccgtgacacaaacatcgcaaggtgaaattcttcgttcaacc
caaaatcttgagataggaacacaaatcacgaccaaactttcacaaggtgaaatcgtaagt
gaaatcatcaaagttaattga
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