Actinobacillus genomosp. 1: NYR63_05745
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Entry
NYR63_05745 CDS
T09109
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
agp
Actinobacillus genomosp. 1
Pathway
agp03030
DNA replication
agp03430
Mismatch repair
agp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYR63_05745 (dnaE)
03430 Mismatch repair
NYR63_05745 (dnaE)
03440 Homologous recombination
NYR63_05745 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agp03032
]
NYR63_05745 (dnaE)
03400 DNA repair and recombination proteins [BR:
agp03400
]
NYR63_05745 (dnaE)
Enzymes [BR:
agp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYR63_05745 (dnaE)
DNA replication proteins [BR:
agp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NYR63_05745 (dnaE)
DNA repair and recombination proteins [BR:
agp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NYR63_05745 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WGE90349
LinkDB
All DBs
Position
1273692..1277168
Genome browser
AA seq
1158 aa
AA seq
DB search
MTQQRFVHLKVHSDFSMINGLAKVKPLVKTAVANNMVAMALTDFSNFCGLVKFYGEALGA
GLKPIIGADIFVRPEPDSEDFFELTLLAKNNTGYHNITLLLSKAYQQGYVEFPLVEKAWL
AELNEGIIVLSGGRNGDVGKALLKENEAEADELVSFYQQYFPNHYYLALCRTGRVDEERY
IQQAVPFSQKHQLPLVAVNDVMFLKEDDFDAHEIRVAIHDSYTLDDPKRPKKYSPQQYFR
SEQEMCALFADLPQAIENTVQIAMRCNVTVRLGEYFLPNFPTGDLSTEDFLVKKSREGLE
ERLEFLFPDPEERKDKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVADT
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYNFVDRISKLIPPDPGMTLAKAFDAEPKL
PELYDADEEVKDLIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSEGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINQRLAREGKEPVRIESIPLDDKKSFDLLL
ASKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGHEEV
SYPDAQYQHESLKPILDPTYGVIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
AQREIFEKGAIKQGVDGDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGFYDECINMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGV
GEGPVEAILEAREKDGIFKDLFDLTARVDLKKINRRTFEGLIMSGAFDKLGPHRAALMKN
LEDALKASDQHSKMEALGQSDMFGVLTETPEEVQNAYANTPKWSEQTVLEGERTTLGLYL
SGHPIGRFLKELSHYAPVRLNELQPTRRGQVVTVAGIIMGSRIAVTKRGSRLGIATIEDR
SGKLDMTLFSEALETYGHLLEKDRIVIATGSVQFDDFSGGLKMSVREIATLDEARSRYAK
SLALAISQEQLTPQFVKELREIIEPNKEGTLPLHFYYQSPEGRALLRSGVEWRVTPKDEM
LDQLKALLGENAVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacaacgtttcgttcatcttaaagtccatagtgatttctctatgattaacggt
ttggctaaggtaaaaccattggtcaaaacggcggttgctaacaatatggtggcaatggca
ttaaccgatttcagtaacttttgcggattggtgaaattttatggcgaagcgttaggtgcc
ggattaaaaccgattatcggtgcggatattttcgttcgccccgaaccggatagcgaagat
ttctttgagctgactttactggcaaaaaacaacaccggttatcacaatattactctttta
ctttcaaaagcttatcaacaaggttatgttgaatttccgttagtcgaaaaagcgtggctt
gccgagttaaatgagggcatcattgtgctttccggcggacgaaacggcgatgttggaaaa
gctctactcaaagaaaatgaagcggaagcagacgaattagttagcttttatcagcaatat
ttcccaaatcattactatctcgcgctctgtcgtactggccgtgtggatgaagaacgctat
attcaacaagcggtgcctttttcacaaaaacaccaattaccgttagttgcggtaaatgac
gtgatgttcttgaaagaagacgattttgatgcgcacgaaattcgtgtggcaatccacgac
agctacaccttggatgatccgaaacgcccgaaaaaatattcgccgcaacaatatttccgt
agcgaacaagaaatgtgtgccttgtttgccgatttaccgcaagcgattgaaaatacggta
caaattgcaatgcgatgcaatgtgaccgtgcgtttaggagaatatttcttaccgaatttc
ccaaccggcgatctttccaccgaagattttttagtgaaaaaatcacgtgaaggtttggaa
gagcgtttggaatttctatttccggatccggaagaacgtaaagacaagcggtctgtttat
gatgaacgtttgcaagtcgagctggacgtaattaaccaaatgggcttccccggctacttc
ctgatcgtaatggaattcattcagtggtcgaaagataacgatattccggttggcccgggg
cgtggttccggggcgggatctttagtggcgtatgcgttaaaaattaccgatttagacccg
cttgccttcgacttgctctttgaacgtttcttaaatcctgagcgtgtttcaatgcccgat
ttcgacgtcgatttctgtatggacggacgagatcgtgtgattgaacacgtcgccgacact
tacggtcgtcaagcggtttcacagatcattaccttcggtacgatggcggcaaaagcggta
atccgagatgtaggtcgtgtgctagggcacccgtataattttgtcgatcgtatttctaaa
ctgattccgccggatccagggatgacgttagcaaaagcctttgatgccgagccgaaattg
ccggaactttacgacgccgatgaagaagtgaaagacttaatcgatatggcacgtaaattg
gaaggcgtaacccgaaatgccggcaaacacgccggtggtgtggttattgcaccaacggca
attaccgatttctcaccgctttattgcgattcggaagggcttcatccggtgactcacttc
gataaaaatgatgtggaatatgccggtttagtaaaatttgacttcttaggcttacgtacg
ctcaccattattaaatgggcattggagatgattaaccaacgcttagcccgagaaggcaaa
gaaccagtgcgtatcgaaagtattccgttagatgataagaaatcttttgatttgttactt
gcttcgaaaacaacggcggtattccagctagagtcacgcgggatgaaagatctgatttca
cgtctgaagcccgactgttttgaagatattatcgcattagtggcattattccgtcccggt
ccgcttgaatccggcatggtacaaaactttatcgaccgtaaacatggtcatgaagaagtt
tcttaccctgatgcacaatatcagcacgaatcgcttaaaccgattttagatccgacctat
ggcgttatcgtttaccaagaacaagtaatgcaaatcgcacaggtacttgccggctatacc
ttaggcggcgcggacttattacgccgtgcaatggggaagaaaaaaccggaagaaatggcg
gcacagcgtgaaatcttcgaaaaaggggcaatcaaacaaggtgttgatggcgatcttgcg
atgaaaatctttgacttggtggaaaaattcgccggctatggttttaacaaatcgcactct
gccgcttatgcgttggtttcttaccaaacattatggctgaaagcacactaccctgccgaa
tttatggcagcggtaatgacttcggagatggataataccgacaaaattgttggcttttat
gacgaatgtatcaatatgggcttaaccgttgttccgcctgatgtaaacagtggtaaacac
cgtttttcagtgaatgaaaaaggcgagattgtttatggcttaggcgcaattaaaggcgtg
ggcgaaggaccggttgaagcgattttagaagcgcgtgaaaaagacggtatcttcaaagat
ttatttgatttgaccgcacgtgtcgatttgaaaaaaatcaatcgccgtacctttgaaggc
ttaattatgtcgggtgctttcgataaattaggcccgcatcgtgctgcactgatgaaaaat
ttagaagatgcactgaaagcttctgatcaacacagtaaaatggaagcactcgggcaaagc
gatatgtttggtgtgctgactgaaacgccggaagaagtgcaaaatgcctatgcaaatacg
ccgaaatggtcggaacaaaccgttttggaaggtgaacgcaccacactcggtttatattta
agcggtcacccaatcggacgattcttaaaagagttatcgcactatgcgccagtacgtcta
aatgaactgcaaccaacacgccgtgggcaagtagttaccgttgccggtattattatgggt
tcacgtattgccgtaaccaaacgaggcagccgtcttgggattgctaccattgaagatcgt
tccggtaaattagatatgacactattctcggaagcactcgaaacttacggtcatctttta
gagaaagatcgtattgtgatcgctaccggttcggtgcaattcgatgattttagcggcggg
ttaaaaatgtcggtgcgagaaatagctactttagacgaagctcgcagtcgctatgcgaaa
agccttgctttagcgattagtcaagaacagctcacaccgcaatttgtaaaagaattacga
gaaatcatcgaaccgaataaagaagggacgttaccgttacatttctactaccaaagtcct
gaaggcagagccttattacgtagcggcgtagaatggcgagtaaccccgaaagatgaaatg
ctcgaccaactcaaagctctactcggtgaaaacgccgtagaactggagttcgaataa
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