Actinobacillus genomosp. 1: NYR63_07020
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Entry
NYR63_07020 CDS
T09109
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agp
Actinobacillus genomosp. 1
Pathway
agp03420
Nucleotide excision repair
agp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYR63_07020 (uvrD)
03430 Mismatch repair
NYR63_07020 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agp03400
]
NYR63_07020 (uvrD)
Enzymes [BR:
agp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYR63_07020 (uvrD)
DNA repair and recombination proteins [BR:
agp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYR63_07020 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NYR63_07020 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WGE90590
LinkDB
All DBs
Position
1533689..1535887
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AA seq
732 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIGVENVPESNILAV
TFTNKAAAEMRHRIEHTLSSSSHHRLFGMWVGTFHSIANRLLRSHYLDANLPQDFQIMDS
EDQQRLLKRLLKLHNIDEKHFPPKHVAWYISAQKDKGKRPKDIDHHNDPNEKKLVQIYQI
YQDACDRAGLLDFAELLIRAYELFRDKPPILQRYQQRFQQILIDEFQDTNNIQYDLIRLL
AGKTGNVMIVGDDDQSIYGWRGAQVENIQRFLNDYQKAETIRLEQNYRSTGHILATANEL
ISNNEDRLGKNLWTDQGDGDPVEIYCAFNELDEARFVASQIKQWKEDEGSLNECAVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPPR
GIGERTLDTIRQITRNRQITLWQAIQVAVQEEQLSGRAASALLRFVELINALEQETEQMP
LFEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATKQFSKPDEAEEMSDLTAFLT
HASLEAGEAQASPHQDYVELMTLHSAKGLEFPRVFMVGVEEGIFPSGMSFDEGRLQEERR
LAYVGITRAKKKLTISYAELRRLYGKEERHIASRFIAELPEQHIREVRLRGSINRAASFA
QSTPFAKNSAKTTASCLEDNSWKMGQKVQHAKFGQGTIINVEGSGEATRLQIAFAGNGIK
WLIAKMANLTKI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttattattagacggtttaaatgataagcagcgagaggctgtcgctgcg
ccgttgggcaattatttagtattggcgggagccggttccggtaaaacacgggtactgacc
catcgtattgcatggttaatcggtgtagaaaacgtaccggaatcgaatattctagcggtc
acctttaccaataaagcggcagcggaaatgcgtcatcgtatcgaacataccctttcttcc
agcagccatcaccgcctgttcggtatgtgggtcggtacattccacagcattgctaaccgc
ttattacgttcgcattatcttgatgccaatctgccgcaagatttccaaattatggatagc
gaagatcagcaacgtttactgaaacgcttgttaaagctgcacaatattgatgaaaaacat
ttcccgccgaaacacgtggcgtggtatatcagtgcgcaaaaagataaaggaaaacgccca
aaagatattgatcatcataacgatccgaacgagaagaaattagttcaaatctaccaaatc
tatcaagatgcctgtgatcgtgccggtttgctagattttgctgaattattgattcgagct
tatgaacttttccgagacaaaccgccgattttgcaacgctaccaacaacgttttcagcag
attttgatcgatgagttccaagataccaacaatattcaatacgacttaatccgtctgctt
gccggtaaaaccggtaacgtgatgattgtcggcgatgacgaccaatcgatttacggctgg
cgtggtgcgcaggttgaaaatattcagcgtttcttaaatgactaccaaaaagcggaaact
attcgtcttgagcaaaattaccgttcaaccgggcatattcttgccactgctaacgaattg
atttccaataacgaagaccgcttgggtaagaatttatggaccgatcaaggcgatggcgat
ccggttgaaatttattgtgctttcaacgaattggacgaagctcgttttgttgcttcacaa
atcaaacaatggaaagaagacgaaggcagcctaaacgaatgtgcggtgttatatcgtagt
aacagccaatctcgtgtgattgaagaagcattgattcaagctaatattccttaccgtatt
tacggcggtatgcgtttcttcgaacgccaagaaatcaaagatgcgctggcatatttacgc
ttgattgctaatcgccaagatgatgcggcatttgaacgagtgattaacacaccgccaaga
ggaattggcgaacgcacgttagatacgattcgtcaaattacccgtaatcgccaaataacc
ttatggcaggcgattcaagtggcagtacaggaagaacaactgtccggcagagccgcttcc
gccttactgcgttttgtcgaattgattaatgcactcgaacaagaaaccgaacaaatgcca
ctgtttgaacaaaccgattttgtaataaaaaaatccggtttatacgaaatgtataaacaa
gaaaaaggggaaaaaggcgaagttcgtatcgagaacttagaagagttggtcaccgctacc
aagcaattcagcaagcctgatgaagcggaagaaatgtcggatctcaccgcatttttaact
cacgcctcattagaagccggcgaagcgcaagcctccccgcatcaggattatgtcgaacta
atgacgttacattcggcaaaaggtttagagttcccccgtgtatttatggtgggtgtggaa
gaaggaattttcccgagcggaatgagttttgacgaaggcagactacaagaagagcgccgt
ttggcttacgtcggcattacccgagcgaagaaaaaattgacgattagttatgccgaactt
agacgtttatacggcaaagaagagcgtcatatcgcctctcgttttattgccgagttgcct
gaacaacatattcgagaagtgcgtttgagaggctccatcaatcgtgcggcaagttttgcc
caaagcacaccttttgcaaaaaattcggcaaaaacgaccgcttcttgtttagaagacaat
agctggaaaatggggcaaaaagtacagcacgctaaattcggacaaggcacgattatcaat
gtagaaggcagcggcgaagcgacccgtttacaaatcgcttttgccggtaacggcattaag
tggttgattgctaaaatggcaaatttaacgaaaatttag
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