Actinobacillus genomosp. 1: NYR63_07490
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Entry
NYR63_07490 CDS
T09109
Symbol
apxIB
Name
(GenBank) RTX toxin T1SS ABC transporter permease/ATPase subunit ApxIB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
agp
Actinobacillus genomosp. 1
Pathway
agp02010
ABC transporters
agp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NYR63_07490 (apxIB)
03070 Bacterial secretion system
NYR63_07490 (apxIB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agp02000
]
NYR63_07490 (apxIB)
02044 Secretion system [BR:
agp02044
]
NYR63_07490 (apxIB)
Transporters [BR:
agp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NYR63_07490 (apxIB)
Secretion system [BR:
agp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NYR63_07490 (apxIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
DUF87
nSTAND3
AAA_16
NB-ARC
AAA_21
PRK
AAA_22
RsgA_GTPase
MeaB
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WGE90670
LinkDB
All DBs
Position
complement(1619354..1621477)
Genome browser
AA seq
707 aa
AA seq
DB search
MDFYREEDYGLYALTILAQYHNIAVNPEELKHKFDLEGKGLDLTAWLLAAKSLELKAKQV
KKAIDRLAFIALPALVWREDGKHFILTKIDNEAKKYLIFDLETHNPRILEQAEFESLYQG
KLILVASRASIVGKLAKFDFTWFIPAVIKYRKIFIETLIVSIFLQIFALITPLFFQVVMD
KVLVHRGFSTLNVITVALAIVVLFEIVLNGLRTYIFAHSTSRIDVELGARLFRHLLALPI
SYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLMFSFIFFAVMWYYSPKLTLVILGS
LPFYMGWSIFISPILRRRLDEKFARGADNQSFLVESVTAINTIKALAVTPQMTNTWDKQL
ASYVSAGFRVTTLATIGQQGVQFIQKVVMVITLWLGAHLVISGDLSIGQLIAFNMLSGQV
IAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTESYQGKLALPEIKGDITFRNIRFRYKPD
APVILNDVNLSIQQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNW
LRRQVGVVLQDNVLLNRSIRDNIALADPGMPMEKIVHAAKLAGAHEFISELREGYNTIVG
EQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMRNMHQICKGRTVIII
AHRLSTVKNADRIIVMEKGQIVEQGKHKELLADPNGLYHYLHQLQSE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggatttttatcgggaagaagactacggattatacgcactgacgattttagcccagtac
cataatattgctgtaaatccggaagaactaaaacataaattcgaccttgaaggaaaaggc
ttagatctaaccgcttggctattagccgcaaaatcattagaacttaaagcaaaacaagta
aaaaaagcgattgatcgtttggcgtttatcgcactaccggcacttgtatggcgagaagac
ggtaaacattttattttgactaaaattgataatgaagcaaaaaaatatttaatttttgat
ttggaaacgcataatcctcgcattttggaacaagcggaattcgagagcttataccaagga
aaactgattttagttgcatcaagagcttccatcgtaggtaagctggcaaagtttgacttc
acttggtttataccggcggtaattaagtatcgtaagatttttattgaaacgttaattgtt
tcaatttttttgcaaattttcgcactaattacaccgctttttttccaagtcgtgatggat
aaagtcttggtacaccgaggtttttcaaccttaaatgtgattacggtggcattagcgatc
gtcgtgctgtttgaaattgtgctaaacggtttacgtacctatatttttgcgcatagtacc
agccgtattgatgtggagttgggagcaagattattcagacatttattagcactccctatt
tcttattttgaaaatcgtcgagtcggcgatacggtggctcgtgtacgagaactcgatcaa
attcgtaacttcttaaccggacaggcacttacttccgtgttggatttaatgttttccttt
atcttctttgcggtgatgtggtattacagccctaaacttactcttgtgattttaggctcg
ttaccgttttatatggggtggtcgatttttatcagccccattttacgccgccgtttagat
gaaaaattcgcacgtggtgcggacaatcagtcattcttagtggaatcggtgactgcaatc
aatacgattaaagcgttggcggttacccctcaaatgactaatacctgggataagcaatta
gccagctatgtatcggcgggattccgtgtaaccacattagctactatcggacagcaaggt
gtacaatttattcaaaaagtcgtgatggttattaccttatggctaggcgcacatttagtg
atttcaggcgatttaagtatcggacaattaatcgcatttaatatgttatccggtcaagtg
attgcaccggtgattcgtttagcgcaactttggcaagatttccaacaagtgggaatttcg
gtaacgcgtttaggtgatgttttaaactctccgaccgagagctatcaaggaaaattggcg
ttaccggaaattaaaggcgatattaccttccgtaatatacgcttccgctacaaaccggat
gcgccggtgattttaaatgatgtgaatttatcgattcagcaaggtgaagtgatcggtatc
gtaggacgttcaggctcagggaagagcaccttaacgaaattaattcaacgtttttatatt
ccggaaaacggtcaggtattaatagatgggcatgatttggcattggcggatccgaactgg
ttacgccgtcaagtcggggtagtattacaagataacgtactattaaatcgtagtattcga
gataatattgccttagcggatccgggtatgccaatggaaaaaattgtccatgcggcaaaa
ttagccggcgcacatgaatttatttctgaattgcgtgagggatataacacgattgttggt
gagcaaggtgcgggactatcgggcgggcaacgccaacgtattgcgattgcacgcgctttg
gtgaataacccgaaaatcttaatttttgatgaagcgaccagcgcattagactatgagtcc
gagcatattattatgcgtaatatgcatcagatttgtaagggaagaaccgtaatcattatt
gcgcaccgtttatctacggttaaaaatgccgaccgtattattgtgatggaaaaaggtcag
attgtggaacaaggtaagcataaagagctgcttgctgatccaaacggcttatatcactac
ttacaccaattacaatcagaatag
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