Actinobacillus genomosp. 1: NYR63_08840
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Entry
NYR63_08840 CDS
T09109
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
agp
Actinobacillus genomosp. 1
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agp03009
]
NYR63_08840 (rimO)
Enzymes [BR:
agp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NYR63_08840 (rimO)
Ribosome biogenesis [BR:
agp03009
]
Prokaryotic type
ribosomal protein modification factors
NYR63_08840 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
NTPase_1
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
WGE90916
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Position
complement(1903191..1904522)
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AA seq
443 aa
AA seq
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MSTTPNIGFISLGCPKNLVDSERILTELRTDGYNIIPSYENADLVIVNTCGFIDSAVQES
LEAIGEALEENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVMRHVHKYVPRPERN
IYTSLVPAQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRPIVQVLDEAKRLAD
SGVKELLIVSQDTSAYALDQSKENQNKTVFWNGAPIKNNLITLCEQLGTLGIWVRLHYVY
PYPHVDDLIPLMAQGRILPYLDIPLQHASPKVLKAMKRPGSIDRTLERIKKWREICPELT
LRSTFIVGFPGETEDDFQMLLDFLEEAQLDRVGCFKFSPVEGAVATEMVDQIPEDVKEER
FHRFMQVQQRISAARLQQKVGKTLAVIIDEIDEEGIIGRSMADAPEIDGVVYVDNLSGQE
VKVGQVIAVSITNADEYDLWGTC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtactacaccaaatattggttttatcagccttggctgccctaaaaatttagttgat
tccgaacgtattttgacggaattgcgtacagacggttataacattatccctagttatgaa
aatgcggacttagtgattgtaaacacttgcggttttatcgacagtgcagtgcaagagtca
ttggaagctatcggtgaagcattagaagaaaacggtaaagtaattgtgaccggttgttta
ggggcgaaagagaaccaaattcgtgaagtacatccgaaagtcttagaaattaccggtcct
cacagctatgaagcggtaatgaggcacgtacataaatatgtacctcgtccggagcgtaac
atttataccagccttgtaccggcacaaggagtaaaacttacgcctaagcattatgcctat
ttaaaaatttcggaaggctgtgaccaccgttgtaccttctgtattattccgtcaatgcgc
ggcgatttagatagccgtccgattgtgcaagtattagatgaggcgaaacgtcttgccgat
tcgggcgtaaaagagttactcatcgtttctcaagatacttccgcttatgcgttggatcag
tcaaaagaaaatcaaaacaaaacagttttctggaacggtgcgccgattaaaaataattta
atcacgttatgtgaacaattaggaacgctaggtatttgggttcgcttacattatgtctat
ccgtatccgcatgtagatgatttaattccgttaatggcgcaaggcagaattttgccgtat
ttggatattccgttacaacatgccagcccgaaagtattaaaggcgatgaaacgcccaggt
tcgatcgatcgtactttagaacgtattaaaaaatggcgtgagatctgtccggaactaaca
ttacgttcaacctttatcgtcggcttcccgggtgaaacggaagatgatttccaaatgttg
ttggatttcttagaagaagcacaattagatcgtgtcggttgtttcaaatttagtccggtt
gaaggtgcggttgcaacagaaatggttgatcaaataccggaagacgtgaaggaagaacgt
ttccatcgttttatgcaagttcaacaacgtatttctgcggcacgtttacaacaaaaagtg
ggtaagacactagcagtaattattgatgagattgacgaagaaggcattatcggtcgttca
atggcggatgccccggaaattgacggcgtagtctatgttgataatctttccggtcaagaa
gtgaaagtcggtcaagttattgcggtaagcattaccaacgcagacgaatacgacctctgg
ggaacttgttaa
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