Actinobacillus genomosp. 1: NYR63_09220
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Entry
NYR63_09220 CDS
T09109
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
agp
Actinobacillus genomosp. 1
Pathway
agp00541
Biosynthesis of various nucleotide sugars
agp01100
Metabolic pathways
agp01250
Biosynthesis of nucleotide sugars
Module
agp_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
agp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NYR63_09220 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
agp01005
]
NYR63_09220 (rfaD)
Enzymes [BR:
agp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NYR63_09220 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
agp01005
]
Core region
NYR63_09220 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
WGE90985
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Position
complement(1981265..1982191)
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AA seq
308 aa
AA seq
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MIIVTGGFGMIGSNIVKALNEIGRKDILVVDNLKNGEKFVNLVDLDIADYCDKEDFIASI
IAGDDFGEIDAVFHEGACSATTEWDGKYLMHNNYEYSKELLHFCLDRRIPFFYASSAATY
GGRSDNFIEERKFEQPLNAYGYSKFLFDEYVRQILPEADSPVCGFKYFNVYGPREQHKGS
MASVAFHLNNQMLKGENPKLFEGSETFLRDFVYVEDVAKVNIWAWQNSISGIYNLGTGKA
ESFQAVAQAVIDFHGKGEIEKIPFPDHLKSRYQTFTQADLTKLRAAGYTGTFKTVAEGTK
EYMAWLNR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacaggcggctttggtatgatcggtagcaatatcgtcaaagcattaaat
gaaatcggcagaaaagatattctggttgtagataacttaaaaaacggcgaaaaattcgta
aatttagtagatttagatattgcggattattgtgataaagaagattttatcgcttcgatc
attgccggcgatgatttcggcgagattgatgcggtattccacgaaggtgcttgctcggca
actaccgaatgggacggcaaatacttaatgcacaataactacgaatattcaaaagagtta
ttacatttctgtttagatcgccgaattccgttcttctacgcatcaagtgcggcaacttac
ggtggccgttcggataactttattgaagagcgtaaatttgaacaaccgctcaatgcttac
ggttactcaaaattcctatttgacgaatatgtacgccaaattttaccggaagcggattcg
ccggtatgcggttttaaatatttcaacgtgtacggcccgcgtgaacaacacaaaggatca
atggcaagcgtggcgttccacttaaacaatcaaatgctgaaaggcgaaaacccgaaatta
ttcgaaggttcagaaaccttcttacgtgatttcgtgtatgtggaagatgtggcgaaagta
aatatttgggcgtggcaaaacagtatttccggtatttacaacctcggtaccggcaaagcg
gaatcgttccaagcggtcgcacaagcggtgatagacttccatggcaaaggcgaaatcgaa
aaaatcccattcccggatcatttaaaatctcgctaccaaaccttcacccaagcggatcta
accaaactccgtgcggcaggctacaccggtacatttaaaaccgtagccgaaggtacgaaa
gaatatatggcgtggttaaatcgctaa
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