Agarivorans sp. B2Z047: LQZ07_00020
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Entry
LQZ07_00020 CDS
T08685
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
agq
Agarivorans sp. B2Z047
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agq03032
]
LQZ07_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
agq03400
]
LQZ07_00020 (gyrB)
Enzymes [BR:
agq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LQZ07_00020 (gyrB)
DNA replication proteins [BR:
agq03032
]
Prokaryotic type
DNA Topoisomerases
LQZ07_00020 (gyrB)
DNA repair and recombination proteins [BR:
agq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQZ07_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UQN42900
LinkDB
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Position
3620..6034
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AA seq
804 aa
AA seq
DB search
MAENEYGSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCSDV
VVTIHNDGSVSVSDDGRGIPVDIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSIKLQLTVKRQGHVYEQFYTLGEPDAPLAVVGDTDKTGTELRFWPSDEIFSDT
KFHYDILAKRLRELSFLNSGVSIILKDERDDKQDHFCYEGGIQAFVSFLNTNKTPIHDKA
FSFNFQRDDGIAVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNSYMEK
EVNKKDKSSATGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKSAVEQTMGEKLSEY
LLENPQEAKIITQKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQEKDPALSEL
YIVEGDSAGGSAKQARNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITAMGCGIGR
DEYDPDKTRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYIYIAQPPLYKVKKG
KQERYVKDEESLTEYLTTLALDNSGLYVNPEAPAIGGEALESLVTQYRRVWKNNERLARR
YPISLLSQMVYQRALNVDELKDAEALEQWSEELIAPVNAELPSGNYYSVEIEKHDERDIY
YPVVTLRQHGVDVSFKFEPEFFASNDYKDICSLYDNLNNLIEEGAYVKRGEKTKPVTSFE
EALNWLMAESRRGLYIQRYKGLGEMNPDQLWETTMDPETRRMLKVTVEDAIACDQLFTTL
MGDQVEPRRNFIEDNALNVENLDV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgaatatggctcatcgagtattaaggtactaaagggccttgatgcagta
agaaaacgtcctgggatgtatattggcgataccgatgatggctcaggtttacatcacatg
gtcttcgaagttgtagataactctattgatgaagcattggctggccattgttctgatgtt
gtagtgacaattcacaacgatggatcggtatctgtatccgatgatggtcgtggtattcca
gttgatattcaccctgaagaaggtgtgtctgcagctgaagtaatcatgacggttctccac
gctggtggtaaatttgacgataactcttataaagtatctggtggtttgcacggtgttggt
gtatcggtagttaacgccttgtctattaagctgcagctaacagttaagcgtcaagggcac
gtttatgagcagttttatactctgggtgaacctgatgcgccgttagcggttgttggcgat
actgataaaactggtaccgagttacgcttttggcctagtgatgaaatcttctctgacact
aagttccattacgatattcttgcaaaacgtttgcgtgaattgtcattcttgaactcaggt
gtgtctatcatcttaaaagatgagcgtgatgataagcaggaccacttctgttatgaaggt
ggtattcaggcttttgtttcgttccttaataccaacaaaacaccaatccacgataaagcg
tttagctttaacttccaacgtgatgacggtattgcagtagaagtagcgatgcagtggaac
gatggtttccaagaaaacatctattgttttactaacaacattcctcagcgtgatggtggt
actcacttagctggctttagagctgcgttaactcgtacccttaacagctacatggaaaaa
gaagttaataagaaagataaaagcagtgccacgggtgatgatgctcgtgaaggtctaact
gcggttatctcggttaaggtacctgatccaaaattctctagccaaactaaagacaagtta
gtgtcttcggaagtgaagtctgcagttgaacaaaccatgggtgaaaagctaagtgagtac
ttattagaaaacccacaagaagctaaaattatcacgcaaaaaattattgatgcggctcgt
gctcgtgaagctgcacgtaaagctcgtgatatgactcgtcgcaaaggcgccttagattta
gctggtttacctggtaagttagccgactgtcaggaaaaagaccctgccttatctgaacta
tatatagtggagggtgattctgcgggtggtagtgctaaacaagcgcgtaaccgtaagaac
caagcgattcttccactaaaaggtaaaatcttaaacgtagaaaaagcccgctttgataag
atgttatcttctcaagaagtggcaacgctgattactgccatgggttgtggtattggtcgt
gacgagtacgatccagataaaacgcgttaccacaacatcattatcatgaccgatgctgat
gtcgatggctcgcacattcgtactttgctattgaccttcttctatcgtcaaatgccagaa
attattgagcgtggctacatttacattgctcagcctcctttatataaagtgaagaaaggc
aagcaagagcgctatgtaaaagatgaagaatcgctaactgaatacctaaccaccttggcg
ttagataattctggtttatatgtaaatccagaggctcctgctattggcggtgaagcgcta
gaaagtttagtgacgcagtatcgccgtgtttggaaaaacaacgagcgtttagcgcgtcgt
tacccaatatcattattgagccagatggtttaccagcgtgcgcttaatgttgatgaactt
aaagatgctgaagcattagagcaatggtctgaagagcttattgctccggttaatgctgag
cttcctagtggtaactactactcagttgaaatagaaaaacacgatgaacgtgatatctat
tatcctgttgttacactgcgtcagcatggtgtggatgtaagctttaagttcgaacctgag
ttctttgcttccaatgactataaagatatttgtagcttatacgataatcttaataactta
atagaagagggtgcttacgttaaacgtggtgagaagaccaagcctgttactagttttgaa
gaagcgcttaactggctaatggctgagtcgcgccgtggtctatacattcaacgttataaa
ggtttgggcgaaatgaacccggaccaactttgggaaactactatggacccagaaacgcgt
cgtatgttgaaagtaacggttgaagatgcaattgcttgtgaccagttgtttactacttta
atgggtgaccaagttgagccgcgtcgtaactttatcgaagacaacgcattgaatgtggaa
aacctagacgtttaa
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