KEGG   Agarivorans sp. B2Z047: LQZ07_07560
Entry
LQZ07_07560       CDS       T08685                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
agq  Agarivorans sp. B2Z047
Pathway
agq03030  DNA replication
agq03430  Mismatch repair
agq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:agq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LQZ07_07560
   03430 Mismatch repair
    LQZ07_07560
   03440 Homologous recombination
    LQZ07_07560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agq03032]
    LQZ07_07560
   03400 DNA repair and recombination proteins [BR:agq03400]
    LQZ07_07560
Enzymes [BR:agq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LQZ07_07560
DNA replication proteins [BR:agq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LQZ07_07560
DNA repair and recombination proteins [BR:agq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LQZ07_07560
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: UQN44319
LinkDB
Position
complement(1648881..1649504)
AA seq 207 aa
MTAQAPANTVVVLDFETTGLTPTQGDRAIEIGAVLLEDGQATARFQELMNPGFRISSFIE
DYTGITNTMLQEAAPCDEVMERFYQFIGQHNMVAHNASFDQRFLEAEFAQIGRRLNGDFA
CSMVLSRRLFQDAPNHKLGSLVAYNNIDNDGVFHRALADSEMTAKLWLCLLEQLEQHYSL
INPSFALMQQISRKSKANVASFLHKIA
NT seq 624 nt   +upstreamnt  +downstreamnt
ttgaccgctcaagcccctgctaataccgttgttgttctcgattttgaaaccacaggttta
acgccaactcaaggcgatagagccatagaaattggtgccgtattactagaagatggccaa
gccacagcgcgctttcaagagttgatgaaccctggctttcgcatttcttcttttatcgaa
gactacacgggtatcactaatactatgctacaagaggcggctccttgcgatgaggtaatg
gagcgcttttatcaatttattggccagcacaatatggtggcgcataacgcatcctttgat
cagcgttttttagaagccgagtttgcccaaatagggcgacgacttaacggcgactttgca
tgctcgatggtattgtcacgccgcctatttcaagacgcgcccaaccacaaattgggcagc
ttagttgcttacaataacatcgacaatgatggcgtttttcaccgtgcgttagccgattct
gaaatgacagccaagctttggctgtgtttactcgagcaattagagcaacactattcgtta
ataaatccaagctttgcgctaatgcagcaaattagtcgtaagagcaaagcaaatgtcgcg
agctttttacacaaaattgcgtaa

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