Agarivorans sp. B2Z047: LQZ07_08070
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Entry
LQZ07_08070 CDS
T08685
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQZ07_08070 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agq03019
]
LQZ07_08070 (pnp)
03016 Transfer RNA biogenesis [BR:
agq03016
]
LQZ07_08070 (pnp)
Enzymes [BR:
agq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LQZ07_08070 (pnp)
Messenger RNA biogenesis [BR:
agq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LQZ07_08070 (pnp)
Transfer RNA biogenesis [BR:
agq03016
]
Prokaryotic type
tRNA degradation factors
LQZ07_08070 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_2
aRib
CsrA
DUF6226
Motif
Other DBs
NCBI-ProteinID:
UQN44416
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All DBs
Position
1764872..1766986
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AA seq
704 aa
AA seq
DB search
MNPIVKTFKYGENTVTIETGAIARQATAAVMVTMDDTTVFVSVVGKKTATPGQDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSEEETLIARLIDRPIRPLFPDGFVNEVQVVATVVSVN
PQVQPDIVALIGTSAALSLSGIPFNGPIGAARVGYIDGNYILNPTTEELPESKLDLVVAG
TESAVLMVESEAELLSEEVMLGAVVYGHEQSNAVITAINELCEEAAKPAWEWEAPEVNVA
LKDKVAALAEAKLTEAYQITDKAERYAEVGEIKKAVVEALTAEDEALDSQEIGDELGKLE
KNVVRSRIIAGEPRIDGREPDMIRALDVMTGVLPRTHGSSVFTRGETQALVTCTLGTERD
AQMIDSLAGLQTSRFMLHYNFPPYCVGETGFIGSPKRREIGHGRLAKRGVAAVMPSAEDF
PYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEGDKFVVLSDI
LGDEDHLGDMDFKVAGSSEGISALQMDIKIEGITKEIMEIALRQAQGARLHILGVMDQAI
GTSREEISEFAPRIHTLKINPEKIKDVIGKGGATIRALTDETGTTIEIEDDGTVKVAATD
NAQAQEAIKRIEQLTAEVEAGQFYEGKVVRLADFGAFVEILPGKDGLVHISQISQERVAN
VSDHLTVGDIVKVKVLEVDRQGRVRLSIKEAAAPSEAPAEKPAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctatcgtaaaaacgtttaaatacggtgagaatacagtcaccattgaaactggc
gctatcgctcgtcaagctacagctgccgtaatggttactatggacgatacaacagtattt
gtatcagtagtgggtaaaaaaactgctacacctggccaagatttcttcccgttgactgtg
aactaccaagaacgtacttacgcagcaggtaaaattcctggtggtttcttcaagcgcgaa
ggtcgtccttccgaagaagaaacgttaatcgcacgtttgattgaccgtccaatccgtcca
ttgttcccagatggcttcgtaaacgaagtacaagttgtggcaacagtggtttctgtaaat
ccacaagttcagccagacatcgtggcgttaatcggtacttctgcggcgctaagcctttca
ggtattccatttaacggcccaattggtgctgctcgtgttggttacatcgatggtaactac
atccttaacccaaccacagaagagctaccagaaagcaagctagaccttgttgtagcaggt
accgaaagtgccgttcttatggttgagtcagaagcagaattactttcagaagaagtaatg
cttggcgcggttgtttatggtcatgagcaatcaaatgcggtaattactgccattaacgaa
ctgtgtgaagaagctgctaaacctgcttgggaatgggaagcgccagaagttaacgttgca
cttaaagataaagtagcagcattagcagaagctaagttaactgaagcttaccaaattacc
gacaaagcagagcgttacgctgaagttggcgaaatcaaaaaagcggttgttgaagcatta
actgctgaagacgaagcgctagacagccaagaaattggtgacgagctaggcaagttagag
aaaaacgtagttcgttcacgcattattgctggtgagccgcgtatcgatggtcgtgaacca
gatatgatccgtgcgctagacgtaatgactggcgtattaccacgtactcacggtagctct
gtattcacccgtggtgaaactcaggctcttgtaacatgtacactaggtacagaacgtgat
gcacagatgattgactcgctagctggcttgcaaacatctcgcttcatgcttcactacaac
ttccctccttactgtgttggcgaaacgggcttcatcggttcacctaagcgtcgtgaaatt
ggccacggtcgtttggctaagcgtggtgttgctgcggtaatgccaagtgctgaagacttc
ccatacactgtacgtgtagtatctgaaatcactgaatcaaatggttctagctcaatggct
tctgtttgtggtagctcactagcgcttatggatgcgggtgtaccaattaaagcttctgtt
gcgggtatcgcaatgggtctagtaaaagaaggcgacaagttcgttgttctttctgacatt
ttaggtgatgaagatcacttaggtgacatggactttaaagtggctggttcttctgaaggt
atctctgcattgcagatggatattaagattgaaggtatcactaaagaaattatggaaatt
gccctacgccaagcgcaaggtgcacgtttacatattctaggtgtgatggaccaagctatc
ggtacttctcgtgaagagatttctgagtttgctccacgtatccacacgcttaagatcaac
ccagagaagatcaaagacgtaattggtaaaggtggtgcaactattcgtgcacttactgac
gaaactggcactactatcgaaatcgaagatgacggtacagtgaaagttgcagcaactgat
aacgcgcaagctcaagaagcgattaaacgtattgagcagctaactgctgaagttgaagcg
ggccaattctacgaaggtaaagttgttcgccttgcagacttcggtgcatttgttgaaatc
ttgccaggcaaagatggcctagtacacatttcgcaaatctctcaagagcgtgttgctaac
gtttctgaccacctaactgttggtgacatagtgaaagttaaagtactagaagtagaccgc
caaggccgtgtacgcctaagtattaaagaagcggcagcgcctagcgaagcaccagcagaa
aagcctgctgaataa
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