Agarivorans sp. B2Z047: LQZ07_13505
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Entry
LQZ07_13505 CDS
T08685
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LQZ07_13505 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agq03000
]
LQZ07_13505 (nifA)
Transcription factors [BR:
agq03000
]
Prokaryotic type
Helix-turn-helix
Other families
LQZ07_13505 (nifA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
bpMoxR
NarQ_GAF-like
HVO_2928_N
MCM
AAA_3
AAA_16
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UQN40794
LinkDB
All DBs
Position
complement(2924741..2926288)
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AA seq
515 aa
AA seq
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MDYSTKRESHIAEQHLAALYDVSSVLTNSLDYKQSVNKVLQVLHDKAMLQHAMLALIAEN
EQMLSVDTVHTPNHANDSVAKNIRYRPGEGIVGTVLTQKQPIVLSKVSNDLRFADKLDLY
ALDLPFIAVPIKKSNEVLGVLAAQPQIDAPEKLALFTRFLEMTANLIAKSVLLAKDVAVQ
TDQLEAERDRLRRKVRSNYSMDNIVGHSRVMRRVFEQIRLVSKWDSTVLIRGESGTGKEL
IANAIHYNSPRATGPFIKLNCAALPDNLLESELFGHEKGAFTGAIKQRKGRFEMADGGTL
FLDEIGEISSAFQAKLLRVLQEGEFERVGSTQTINVDVRILAATNRNLEEEVKQDRFRED
LYYRLNVMPMFPPPLRDRIEDLPDLAEFLIEKLAKQQRRKLQLTDGAIRMMMAYDWPGNV
RQLENLLERASVMSESGVIDQDLIVIDGLDGPKISPRPSIEKVNLESQEMDERERVIAAL
EQAGWVQAKAARLLNMTPRQIAYRIQVMNINVRQL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggactattcaacaaaacgcgaatcacatatcgccgagcaacacttggcagctttgtac
gacgtaagcagcgtattaactaatagcttggattacaaacaaagtgtaaacaaagtgctg
caagtgttgcacgacaaagccatgttacaacacgcaatgttagcgctcattgccgaaaac
gagcaaatgcttagcgtcgatacagtgcatacgccgaatcatgccaacgatagtgttgct
aaaaacattcgttatcgaccaggcgagggcatcgttggtacggtgttaacacagaaacag
cctattgttttaagcaaggtgtctaacgatttacgctttgcagataaacttgatttgtac
gcattagatttaccatttattgcggtaccgattaagaaatccaatgaagtattaggcgta
ttggctgctcaaccacaaatagatgctccagaaaaactagctttgtttacccggtttttg
gagatgaccgcaaacctaattgcaaaaagtgtattgcttgccaaagacgtcgccgtacaa
actgaccaattggaggctgaacgcgacaggttaagacgcaaagtaagaagcaactacagt
atggacaacatcgttggtcattctcgggtaatgcgccgagtgtttgagcaaattcgctta
gtgtctaaatgggatagcacggtacttatacgcggtgaatcgggcaccggtaaagaactt
attgctaatgctattcactacaactcgcccagagctactgggccttttattaaattaaac
tgcgcagccttacccgacaacttgttggagtctgagttgtttggtcatgaaaagggcgcg
ttcaccggagcgataaaacagcgcaaaggccgttttgaaatggctgatggtggcactctg
tttttagatgaaattggtgaaatttcttcagcctttcaagccaagttattgcgagtatta
caggaaggtgagtttgagcgggtaggtagtacccaaaccattaacgtagatgtgcgtatt
ttggcggcaacaaatcgaaacctagaagaagaggttaagcaagatcgttttcgcgaagat
ttgtattaccgactaaatgttatgcctatgttcccgccaccgctgcgtgacaggattgaa
gacttacccgacttagctgagtttttaattgaaaaactggctaaacaacaacggcgtaag
ctacagcttaccgatggcgccattcgtatgatgatggcttatgactggcccggtaatgtt
cgtcagttggagaacctgctcgaacgcgcatcggtgatgagcgaaagtggggtaattgat
caagatttaattgttatcgatggtttagatggccctaaaattagtccacggccaagcatc
gaaaaagttaacttggaaagccaggaaatggacgagagggagcgagttattgcagcctta
gagcaagctggatgggtgcaagctaaagctgctcgcctactcaatatgacaccaaggcaa
atagcttatcgtattcaagtaatgaatattaacgttagacagctttaa
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