Agarivorans sp. B2Z047: LQZ07_14970
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Entry
LQZ07_14970 CDS
T08685
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq00020
Citrate cycle (TCA cycle)
agq00640
Propanoate metabolism
agq00660
C5-Branched dibasic acid metabolism
agq00720
Other carbon fixation pathways
agq01100
Metabolic pathways
agq01110
Biosynthesis of secondary metabolites
agq01120
Microbial metabolism in diverse environments
agq01200
Carbon metabolism
Module
agq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LQZ07_14970 (sucD)
00640 Propanoate metabolism
LQZ07_14970 (sucD)
00660 C5-Branched dibasic acid metabolism
LQZ07_14970 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
LQZ07_14970 (sucD)
Enzymes [BR:
agq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LQZ07_14970 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UQN41068
LinkDB
All DBs
Position
complement(3289679..3290551)
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGFTGGQGTFHSEQAIEYGTQMVGGVSPGKGGQTHLGLPVFNTVSEA
VQATGADATVIYVPAPFCKDAILEAISAGIKIIITITEGIPTLDMLEVKVKLDEAGARMI
GPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSSCVGIGG
DPIPGSNFIDILEMFQNDPKTEAIVMIGEIGGSAEEEAAAYIKENVTKPVVSYIAGVTAP
PGKRMGHAGAIIAGGKGTAADKFAALEDAGVKTVRSLADIGKALREVTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcattctaatcgacaaaaatactaaagtgatctgtcaaggcttcacaggtggtcaa
ggtactttccactctgagcaagctattgagtacggtacgcaaatggtaggtggtgtatca
cctgggaaaggcggtcagactcacttaggtcttcctgtgttcaataccgtaagtgaagcg
gttcaagctactggcgcagacgctacagtgatttacgttccagctcctttctgtaaagac
gctattttagaagcaatctcagctggcatcaaaatcatcatcactattaccgaaggcatt
ccaactttggatatgctagaagttaaagtgaaattggatgaagctggcgcacgtatgatt
ggccctaactgtccgggtgttattacgcctgacgaatgtaagattggtattatgcctggc
cacattcataaagccggtaaagttggtattgtgtctcgctcaggcacacttacgtacgaa
gctgttaagcaaactaccgacgaaggttttggtcagtctagctgtgtaggtattggcggc
gaccctattccaggctctaacttcatcgacattttggaaatgttccaaaacgatccaaaa
actgaagcaatcgtaatgattggtgaaattggtggtagtgcagaagaagaagcagcagct
tacattaaagaaaatgtaaccaagcctgtagtttcttacattgctggtgttactgctcct
ccgggtaagcgtatgggccacgccggtgccattatcgctggcggtaaaggtactgccgca
gacaagtttgctgctcttgaagatgcaggtgttaaaacagtacgtagccttgccgatatt
ggtaaagcattgcgtgaagttaccggttggtaa
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