Agarivorans sp. B2Z047: LQZ07_20060
Help
Entry
LQZ07_20060 CDS
T08685
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
agq
Agarivorans sp. B2Z047
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agq03000
]
LQZ07_20060
Transcription factors [BR:
agq03000
]
Prokaryotic type
Helix-turn-helix
Other families
LQZ07_20060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_2
HTH_30
AAA_5
HTH_8
Mg_chelatase
AAA_3
AAA_7
AAA
HTH_23
HTH_7
HTH_22
AAA_14
nSTAND6
HTH_10
HTH_17
MCM
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UQN42038
LinkDB
All DBs
Position
4343661..4345559
Genome browser
AA seq
632 aa
AA seq
DB search
MSEKSQWYIEHEALIKSSWQRCRESGLTHHSEPNVEHKSAGDLSCLLEQHHQLLETTHHQ
VLPYYENLLSNSNSQVMLADHQGYVLKSWGEQRFKQQHQEIFSPGTGWQEPVLGTNAIGT
ALKTGSVVQIHHDEHFLVANRFMTGSAAPIYGVDREMVGVIDISSDTYLPESHTLGMVKI
MSQAVENQLIISHFNSEHFLLRFNTSPENIDSQWSALIVFDETGLVISANRRAELVLATD
LKLVNISELFEVSVNQLINQPESFQVPLITRQQFRVHGVLHKPKQAKPRVLDFRALLKPE
QNKAQHISEKQAFLLDDLNLGDPVMAKAVAQSKRIVDKEIPILIRGETGVGKEVFVKALH
HSSQRSKQNMVTVNCAAIPQELVESELFGYEKGAFTGSSNKGYIGLIRKADKGTLFLDEI
GDMPLNVQARLLRVLQERKVNPLGSTESYPVDFKLVSATNRNLKDDVEAGSFRQDLYYRV
SGLNIELPALRHRSDRQHLIQFLLNYYAETPQDALITERAMHSFCQHPWPGNIRQLVSVI
QIAQAMSDNQAIDLQHLPDDFFADLDGQTTNVEVFTPSSSQTNLEPEQVKQPNSDDIVAV
YQSLSCNISKTAQQLGISRNTVYKRLRESGYK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagtcacagtggtatatagagcatgaagccctaattaagagttcttggcag
cgctgtcgagaatctggcttaacccatcatagtgagccaaacgtagagcataaatctgcg
ggggatttgtcatgcctattggaacagcatcatcaattactcgaaacaacccaccaccaa
gtactgccgtattacgagaacttgttaagcaacagcaatagccaagttatgctggcagac
catcaaggctatgtattaaaaagttggggggagcaacgctttaaacagcagcatcaagaa
atcttctcaccaggcactggctggcaagaaccagtgctaggcaccaacgccattggcacc
gccttaaaaaccggtagcgtggtgcaaattcatcatgacgagcactttttagtggccaac
cgctttatgaccggttctgcagcacccatttatggggttgatagagagatggtgggagtg
attgatatctctagcgatacttacctgccggaatctcataccctgggcatggttaagatc
atgtcgcaagcggttgaaaatcagctaattatttcgcacttcaatagtgagcactttttg
ctgcgttttaataccagcccggagaacattgatagccaatggtcggcactgattgtattt
gatgaaaccggcttagtgatttcggccaatcgccgtgcagaactagtgttagccaccgac
ttaaagctggtgaacataagcgagctatttgaagtaagcgttaaccaactgattaaccag
cctgagagctttcaagttccattgattacacgtcagcagtttagggtgcatggggtttta
cataaacctaagcaagcaaaaccacgagtattagattttagagccttgcttaagcccgag
cagaacaaggcgcaacacatttctgaaaaacaagcattcttgctcgacgaccttaattta
ggtgacccggtaatggctaaggccgtggctcaaagcaaacgcattgtagataaagagatc
cccattttgatccgcggagaaacaggggtaggaaaagaggtgtttgtaaaagccctgcac
cactcaagccagcgcagcaaacaaaatatggtaacggtaaactgtgcggcgattccccaa
gagttggtggaatcggaactgtttggttatgaaaaaggcgcgtttactggctctagcaac
aaaggttatatagggctgatccgcaaggcagataaaggcaccctctttttagatgaaatt
ggcgacatgcccttgaatgtacaagcgcgcttactaagagtattgcaggagcgcaaagta
aaccccttgggcagtaccgagtcttatccggtagattttaagctagtgtcagcgactaac
cgaaacttaaaagatgatgtagaagcaggcagttttcgccaagatttatactaccgcgtg
agcggtttaaacatcgagctaccagcgcttcgccatcggagtgatcgccaacaccttatc
caatttttgctaaattactatgcagaaacaccgcaagatgccttaattacagaacgtgca
atgcatagcttttgccagcacccttggccaggaaacattcgccagctagtaagtgttatc
caaattgcccaagcgatgtctgataaccaagccatcgacttacagcaccttcccgacgac
ttttttgccgaccttgatggccaaaccactaacgtagaagtatttactccaagctcttcg
caaactaacctagagcctgaacaagttaagcagccaaatagtgatgacatagtcgcggtt
tatcagtcactttcttgcaatatatccaagacagctcaacagcttggtatcagtcgcaat
acggtttacaagcgcttacgagaatctggttacaaatag
DBGET
integrated database retrieval system
