Agarivorans sp. B2Z047: LQZ07_22030
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Entry
LQZ07_22030 CDS
T08685
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LQZ07_22030 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agq03400
]
LQZ07_22030 (uvrA)
DNA repair and recombination proteins [BR:
agq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQZ07_22030 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LQZ07_22030 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_25
nSTAND1
AAA_23
RsgA_GTPase
nSTAND3
AAA_21
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
UQN42427
LinkDB
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Position
4771398..4774226
Genome browser
AA seq
942 aa
AA seq
DB search
MDSIDIRGARTHNLKNISLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGEPRC
PHHNEPLAAQTISQMVDKVFEEPENSKLMLLAPIIRDRKGEHVKTLENLAAQGFIRARID
GEVCDLSDPPELELHKKHNIEVVIDRFKVRASEDLAQRLAESFETALELAEGTAILVDMD
SGETRQLFSANFACPICGYSMTELEPRIFSFNNPAGACQTCDGLGVDQFFDDKKVIVNPE
LSLSGGAIRGWDKRNFYYYQMLKSLAAHFEFDLDMAFQDLSDKHQKVILHGSGRTSIEFK
YMNDRGDVTVRKHPFEGIIPNMRRRYKETESNAVREELAKFISNQECPGCGGSRLREEAR
NVFIGSTNLPEVSCKSIGEAMEFFEALNLTGQRAQIADKILKEICERLKFLINVGLDYLS
LDRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLATLNHLRDLGN
TVIVVEHDEDAIRAADYIVDIGPGAGVHGGEVVAQGSMQQVIDTPSSLTGQYLSGSKSIA
VPSKRQEGSGDYLSLLGASGNNLKNVDLHIPLGLLTCITGVSGSGKSTLINDTLYKIAQK
ALNGAAGEDIAPHKSVKGLDKLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAATQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKSKRYNRETLEIKY
KGKSIHQILEMTVEEARPFFDAVPAIARKLQTLIDVGLTYIKLGQSATTLSGGEAQRVKL
ARELSKRDTGQTLYILDEPTTGLHFHDIELLLEVIHRLRDHGNTIVVIEHNLDVVKTADW
IVDLGPEGGKGGGEILVAGTPEDIVSEQRSHTARFLKPMLAT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggacagtattgatattcgtggtgcccgcacccacaaccttaagaacatttcactgacc
ctccctcgcgataagctaattgttatcactggcttatcgggatctgggaaatcttctctc
gcattcgacacactttacgcagaaggccagcgacgctatgtagagtctctttctgcttat
gcgcgccagttcctgtcattaatggaaaagcccgatgttgatcatatcgaaggtttatca
ccagctatttctatcgagcaaaaatcaacatctcacaacccgcgctctacagtgggaacc
attaccgaaatttacgactatttgcgcttactttacgctcgcgtaggcgagcctcgctgc
cctcatcataacgaaccgctagctgcacaaaccattagccaaatggtcgataaggttttt
gaggagccagaaaacagcaaactgatgttgttggctccgataatacgagatcgcaaaggc
gagcatgtaaaaactctagaaaacttagcggcacaaggttttattcgagcacgcatagat
ggagaagtgtgtgacttaagcgatcctccagagctagagctgcacaaaaaacataatatt
gaagtggtgattgatcgctttaaagttcgcgccagtgaagatttagcccaacgtttggcc
gaatcttttgaaacagccctagagcttgccgaaggcactgccattttagttgacatggac
agcggcgaaactcgccaactgttctcggcaaattttgcctgcccaatatgtggctacagc
atgaccgaactagagccaaggatattctcctttaataacccagcaggggcttgccaaacc
tgtgatggtttaggtgtggatcaattcttcgacgataaaaaggtgattgtaaatcctgag
cttagtttatcgggcggtgccatccgcggttgggacaaacgcaacttctactattaccaa
atgctcaagtcattggcagcgcatttcgagtttgacttggatatggcctttcaagacctt
agcgacaaacaccaaaaagtaattttgcatggctcggggcgcaccagtattgaattcaaa
tacatgaacgatcgcggtgacgttaccgtgcgcaaacacccttttgaagggatcatcccc
aatatgcgtcgccgctataaagaaaccgaatcaaacgcggtgcgcgaagagttggcaaaa
tttattagcaaccaagaatgtccaggctgtggcggcagtcggttacgcgaagaagctcgc
aatgtatttattggtagtactaaccttccggaagtgagctgtaagtccattggcgaagcc
atggagttttttgaagcgctcaatctaacaggccaacgagcacaaattgctgacaaaatc
ctaaaagagatttgtgagaggcttaagtttttaatcaacgtgggcctcgattacctttcg
ttagatcgcagtgccgacacattgtctggcggcgaagcgcagcgaataagactcgccagc
caaattggcgctggtctagtcggtgttatgtatgtgcttgacgaaccgtctataggctta
caccaacgcgataacgaacgcctactcgcgaccctcaatcacctgcgagatttgggcaat
accgtaatagtggtagaacatgatgaagatgccattcgagccgcagactatatcgtagac
attggcccaggcgctggtgtacatgggggagaagttgttgctcaaggctcaatgcaacaa
gtgattgataccccaagctcacttactggacagtatttatctggcagtaaatctatagca
gtacctagcaagcgacaagaaggctcaggcgattacttaagcctactcggcgctagtggc
aataacctcaagaatgtagatttgcatatcccgctaggcttacttacctgcataacaggt
gtatcgggtagcggtaaatctaccttaatcaacgatactttatacaaaattgcccaaaag
gcgctcaatggtgcagctggcgaagatatcgctccacacaaatcggtaaaaggcctcgat
aaactcgataaagtggttgatatagaccaaagcccgatcggtagaacaccgcgttccaac
cccgctacctatacagggatcttcactcctattcgtgaactgttcgccgctacgcaagaa
gcccgttcaagaggttacaaacccggtcgctttagctttaacgtaaaaggtggccgctgt
gaagcctgccaaggagacggcgttattaaagtagagatgcattttttgcccgatgtgtat
gtgccctgcgacgtatgtaaaagcaaacgctataaccgcgaaactttagagattaagtat
aaaggcaagagtattcatcaaattttggaaatgacggtagaagaagctcgaccattcttt
gatgctgtaccagccatagccagaaaactacaaacattgattgatgttggccttacctac
atcaaactcggtcaatcggctacaaccttatcgggcggcgaagcgcagcgagttaaactc
gctcgcgaacttagcaagcgcgatactggccaaaccctttatattcttgatgaaccaacc
acaggccttcactttcatgatattgagctgctgttagaggttattcatcgcttacgtgac
catggtaatactattgttgtaattgaacacaacctagatgtcgttaaaaccgcagattgg
attgtcgatctggggccagaagggggcaaaggtggcggagaaattctagttgctggcact
ccggaagatatcgttagtgaacagcgctcacataccgcccgattcttaaaaccaatgcta
gccacttaa
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