Agarivorans sp. B2Z047: LQZ07_22260
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Entry
LQZ07_22260 CDS
T08685
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
agq
Agarivorans sp. B2Z047
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agq02000
]
LQZ07_22260 (mscM)
Transporters [BR:
agq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQZ07_22260 (mscM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MscS_porin
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
UQN42466
LinkDB
All DBs
Position
4820313..4823591
Genome browser
AA seq
1092 aa
AA seq
DB search
MTLSIFSRGFLVSLLFFCLAVQANVGGESHLKGLISSLDTQPSNLNTQQQQLIYEESLAL
LKEGNSYREKAKYYRGIINNFSRLRKEQQEQLNQYQAPVIENLAELNSNQLNEQLTIWQA
KLSNTNSQIDELKQRQYRIDLDVSENHQRSGPLREQLTTVRAKLEQLEFGVLNEVEEAER
VRAQVNEASLTAQLAMLELAAQSANHRNELLQLEISLLQHTQLAEKRIVESVKNRLSLEH
RAEAQRLSDQLAFAAPELLNDPIVKNLVEQNQLLQTELSALFEQSEDIADQQEEVNDELE
HIKLTFANFKEQVSWLKVTRSYGEYLREQISSLPKFKAVAPIEQQIIEVRISKHRHQNLL
YTQRNQSQRKAQREFIATLNQEQARIFNKHLKLNQQLSDKYLLELDARLFELARLKLDYS
KLNSQLNTINQEANQELFWTADVKAIDLSFFSDIRYSLIWLFSAQQYSQLSDAIAKLSWL
WLGWLLLVAASVAYIYYLKKHWLKGYLQRIDSKTGNITRDKFSYTLANLLVSAVFATPVA
LFIGSVGFALMYEWESSFARDLGDALFNVAIVLWLFHLLQQFCQKNGLLNTHFKWPLVNI
SQAITLIRRVVYVSLPLVFILNLCILQTSQPTYSGLARLAFIALLLWVAYGFHSIYRIEL
PVNYHLDIFKAPQLAKKLIWGAAISIPLMAALASAAGFFATAFTVYWQVVLSFIIAAVFL
LGYLLIHRWMLLQRRRIAFDRAKVRRAEMIAQRQSEEDDPSSSNEGVIDSIEEPVIDLDT
ISAQSLGLLRAALVLSLVLVLLLSWSEMTSAFSFLDNITLWESSSSRAGVATVDAITLRS
LGSALLVFFFAVVLIRNLPGLLELMVLQHLSLNPGTGFAITTMINYMVILFSIFSGFGLL
GIEWSKLQWLVAALTVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRELTGTISNIE
TRATTIVDWDRKEIIVPNKAFITEQFINWSLTDPITRVVLMVQVKQGSDNQLVNKLLQEA
VDANSLVLANPAPEIYFTEYTNNGMKFEMRVHVSEMRYRLPMTHELYTLINDKFKANNIE
IAYPQLDISLNP
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgactttatcgattttctctcgcggtttcctcgtatcgctactgtttttttgcttagcg
gtacaggcgaacgtgggcggagaatctcatctcaaaggcttaatcagctccctagatacc
cagcctagcaacttaaacacccagcaacagcaactcatctatgaagaatccttagcgcta
ctaaaagagggcaatagttaccgcgaaaaagccaaatactaccgcggtattatcaacaac
ttctcccgcctacgaaaagagcaacaagagcaactaaatcaatatcaagcgccggtcatt
gaaaacttagctgagctaaactcgaatcaattaaatgaacagctcactatttggcaggct
aagctcagcaataccaatagccaaattgacgagctaaaacagcgccaataccgcatcgat
ttagatgttagcgaaaaccaccagcgcagcggaccgctgcgcgaacaattaaccacggtt
cgcgcgaagctagagcaacttgagtttggcgtgcttaacgaagtggaagaagccgagcga
gttcgtgctcaagttaacgaagccagcctaaccgcccagttagcgatgctggaactcgct
gcgcaaagtgccaaccaccgaaacgagctgctgcagcttgaaataagcttgctacaacac
actcagttggcagaaaagcggattgtagaaagcgttaaaaatcgcttgtcactagagcat
cgagcagaagctcaacggctatctgatcagctagcttttgccgctcccgagttacttaat
gacccgatagtgaaaaacttagtagaacaaaatcagttactacaaacagagctctcagcc
ttatttgaacaaagtgaagatattgccgaccaacaggaagaagtaaacgacgagcttgaa
cacatcaaactcacctttgctaattttaaagaacaagtatcctggttaaaggtcactcgc
tcctatggtgaatacctacgagaacagatctcaagtttgccaaaattcaaagcagttgcg
ccaatagagcaacagatcattgaagtgcggatcagtaaacatcgtcaccaaaatctactt
tatacccaacgtaatcagagccaaagaaaggctcagcgcgagttcatcgccaccttaaat
caagaacaagccagaatatttaacaagcatttgaagcttaaccagcaactttcagacaaa
tacttactggagttagacgcaagattatttgagttagctcgacttaaactggattactca
aaactaaacagtcaactgaacaccattaaccaagaagccaaccaagagctgttttggacg
gccgatgtaaaagccatcgatttaagctttttcagtgatattcgttactctttgatatgg
ttatttagcgctcagcaatactcacaactcagcgatgccattgccaagctgtcttggcta
tggttaggctggttactgctagtggcagccagtgttgcttatatctactacctaaaaaaa
cattggcttaaaggctacctgcagcgcatcgattccaaaaccggcaacattacccgtgac
aaatttagctatacccttgccaatttgttagtcagtgcggtatttgccactcccgtggcg
ctatttattggcagtgtgggttttgccctaatgtatgaatgggagtcttccttcgctcgc
gacttgggagatgccctatttaacgttgccatcgtgttatggctattccatttgttacag
cagttttgccagaaaaacggcctgctaaatacccatttcaaatggcctttggtaaacatc
agccaagcgattaccttaatccgccgtgtggtttacgtaagcttgcccttagtattcatc
cttaatctgtgcatattacaaaccagtcagccgacctatagtggcttggcacgcttggcc
tttattgcattgttattgtgggtagcttacggctttcacagtatttatcgcattgagctt
ccggtgaactatcacttagacatttttaaagcaccacagttagcgaaaaaactgatttgg
ggcgccgccattagcatccccttaatggcagcactcgcctctgcagctggcttttttgcc
accgcatttacggtttattggcaggttgtgcttagcttcatcatcgctgcggttttctta
ttgggctatttgcttattcaccgttggatgcttttacaacgccgccgaattgcctttgac
cgagcaaaagtgcgccgcgctgaaatgattgctcaacgccaatctgaagaagacgaccct
tctagctcaaatgaaggagtgattgattcaatcgaagaaccagtcatcgacctagacacc
attagcgcccagtcgttgggtctacttcgcgctgccttggtactgtcgctagtattggtt
ctgctgttgagttggtcggaaatgaccagtgcgttttcgtttctagacaacattacattg
tgggaaagtagctctagccgcgcaggtgtagccacggtagatgccattacgctgcgctct
ttaggctctgccctattggtattcttttttgctgtagtgcttatccgcaacttacctggt
ttgttagaactgatggtcttgcagcacttatcacttaaccctggcaccggttttgccatc
accaccatgattaattacatggtgatactgtttagtattttcagtggttttggtttgttg
ggcatcgagtggtcgaaacttcaatggttagttgctgcacttactgtaggtttaggtttt
ggtctgcaagagatttttgctaactttatttcgggcttaattattctgtttgaaaagcca
attcgaattggcgataccgtgacaattcgcgaacttaccggcacgatttctaacattgaa
actcgcgctaccactatcgtcgattgggatcgcaaagaaattatcgtgcctaacaaggcc
tttatcacggaacaatttattaattggtcgctcaccgatccaatcacccgtgtggtgtta
atggtgcaagttaaacaaggctctgataatcagctagtaaacaaactattgcaagaagct
gtagatgctaacagcttggtactagccaaccccgcaccagaaatatactttaccgaatac
accaacaacggaatgaaatttgaaatgcgtgttcacgtgagtgaaatgcgctaccgctta
ccgatgacccacgaactgtacactttgatcaatgacaagtttaaggcgaataacatagag
atagcctacccacaattagatatatctctcaatccctga
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