Agarivorans sp. B2Z047: LQZ07_23320
Help
Entry
LQZ07_23320 CDS
T08685
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq03030
DNA replication
agq03410
Base excision repair
agq03420
Nucleotide excision repair
agq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQZ07_23320 (polA)
03410 Base excision repair
LQZ07_23320 (polA)
03420 Nucleotide excision repair
LQZ07_23320 (polA)
03440 Homologous recombination
LQZ07_23320 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agq03032
]
LQZ07_23320 (polA)
03400 DNA repair and recombination proteins [BR:
agq03400
]
LQZ07_23320 (polA)
Enzymes [BR:
agq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQZ07_23320 (polA)
DNA replication proteins [BR:
agq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LQZ07_23320 (polA)
DNA repair and recombination proteins [BR:
agq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LQZ07_23320 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQZ07_23320 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
HHH_5
L27
Motif
Other DBs
NCBI-ProteinID:
UQN42669
LinkDB
All DBs
Position
complement(5040731..5043490)
Genome browser
AA seq
919 aa
AA seq
DB search
MATLPDQPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLKQFKPEHIVV
VFDAKGKTFRDDIYKEYKANRPSMPDDLRSQIAPLHAVIKAMGLPLVAIEGVEADDVIGT
LAKQASAENKAVVISTGDKDMAQLVDENITLINTMTDTVMDRAGVIDKFGVPPELIIDYL
ALMGDKVDNIPGLPGVGEKTALAMLQGIGGVDDLLADPDAVAPLGFRGSKTMPKKLREHA
EDARLSYLLATIKCDVEVGFSMDDMLRTEEDKDALIKLFGELEFKRWLSEALSPSSNSAA
AEPNAEAEVVAPAVELKGEYETILTKQQFEEWFERLNSAELIAIDTETTSLNYMQAELVG
LSFAVEAGKAAYLPVAHDYLDAPEQLERDWVLAQLKPLLEDPNKAKVGQNLKYDASVLAR
YDISLKGIKYDTMLESYVLNSTITRHDMDSLSLQYLQHKTIKFEDIAGKGAKQLTFNQIE
LETAAPYAAEDADVTLRLHQTLWAKLEKEPKLKSLFEEVELPLVSVLSQTERQGVRIDSQ
RLAQHSLSLGERIDGLEKQAHELAGEPFNLGSPKQLQTILFEKMELPVIKKTPKGAPSTA
EEVLQELALDYSLPKVILEYRSLSKLKSTYTDKLPKMVEPSTGRVHTSYHQAVTATGRFS
STDPNLQNIPIRHEEGRKVRQAFVPADGYKLVAIDYSQIELRIMAHLSQDAGLLKAFAAG
EDIHKATAAEVFGKELEAVSGDERRSAKAINFGLIYGMSAFGLAKQLGIARADAQNYMNR
YFERYPAVLDYMDSTRDFCQEHGYVETLFGRRLYLPEINSRNGMRKKAAERAAVNAPMQG
TAADIIKKAMIAVAQWLDTQPSEHCKMLMQVHDELVFEVLESELDKVVPKLTELMEQAVT
LDLPLVAESGIGENWDEAH
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccttcccgaccaacccctagtgcttgttgacggctcttcttatctttatcgc
gcttactacgctcctcctcatctaactaactctaaaggtgaagccaccggcgcagtttat
ggcgtggtgaacatgctacgcagtttgcttaagcaatttaagccagagcacattgtggtg
gtgtttgatgccaagggtaaaacctttcgtgacgacatctataaagaatacaaagccaat
cgcccttctatgccggatgatttgcgcagtcaaattgcccctttacacgcagtaattaaa
gcgatgggtttgcctctagtcgccattgaaggtgttgaagccgatgatgttattggcacc
ttggctaagcaagcttcggccgagaacaaagcggtagtgattagcactggcgataaagac
atggcgcagctggtggatgaaaatatcaccttgattaataccatgaccgatacggtgatg
gatcgtgctggcgttatcgataagtttggcgtaccgccggagctgattattgattactta
gcgctaatgggcgacaaagtagataacattcctggcttacctggggtgggtgagaaaact
gctttggccatgttgcaaggcattggtggcgtggatgacttattggccgacccagacgcg
gttgcaccattaggttttcgcggctctaaaaccatgcctaaaaagttgcgtgaacatgcc
gaagatgcccgtttatcctatttattagccaccattaaatgtgatgttgaagtcggtttt
agcatggatgacatgttgcgtaccgaagaagataaagatgcgctgattaaattattcggt
gaattggagtttaagcgctggctgagtgaagcgcttagcccatcaagtaacagcgccgca
gcagaaccaaatgctgaggccgaagtggttgctcctgctgttgagcttaaaggtgagtac
gagactattcttactaagcagcagtttgaagaatggtttgaacgcttaaatagcgctgag
cttatcgctattgataccgaaaccacctcgcttaactacatgcaagctgaactagtgggt
ttatcttttgccgttgaagcaggcaaagcggcttacttaccggtagctcacgattattta
gatgcgcctgagcaactagagcgtgactgggtattagcgcagcttaaaccattattggaa
gatcctaataaagcgaaagttggccaaaaccttaagtacgatgccagtgtgcttgcacgc
tacgacatttcgctcaaaggcattaagtacgacaccatgttggagtcctatgtgctcaat
agcaccattactcgccacgatatggactcgttgtcgttgcagtacttgcaacacaaaacc
atcaagtttgaagacatcgcgggtaaaggcgctaaacagcttaccttcaatcaaattgaa
cttgaaacagcagcaccttatgcagcagaagatgcagacgttaccttacgcttacaccaa
actctgtgggccaagctagagaaagagccaaagctgaaaagcttattcgaagaagtcgag
ttgcctttggtcagtgtattatcgcaaaccgagcgtcaaggcgtgcgtattgatagccaa
cgcttagcacagcatagtttgtctttaggcgagcgtatcgacggtttagagaagcaagca
catgaactagccggtgaaccatttaacttaggttcccctaagcagctgcaaaccattttg
tttgaaaaaatggaattgccagtcattaagaaaaccccaaaaggagcgccgtctactgcc
gaagaagtgctgcaagaactggcgttagattacagtttaccaaaagtgattttagaatat
cgaagcctgtctaagctaaaatctacttacaccgacaaattgcctaaaatggtagagcca
agcactggcagagtgcatacctcttatcatcaagcggtaacagcaacggggcgcttctca
tctaccgatcctaacttgcaaaatattcctattcgtcatgaagaaggacgtaaagtacgt
caggcttttgtacctgccgatggttacaaacttgtcgcgatagattattcacaaattgag
ctgcgtatcatggcgcatctttctcaggacgctggtttgctaaaagcctttgctgccgga
gaagacattcataaagccactgctgcagaagtatttggtaaagagctagaagcagtgagc
ggtgatgagcgccgcagtgccaaggcgattaactttggcctaatttacggtatgagcgcc
tttggtttagccaagcagttaggcattgctcgagccgatgcgcaaaactacatgaatcgt
tattttgagcgctaccctgcggtgttggactacatggacagcacccgagatttttgccaa
gaacacggatatgtagaaaccttatttggccgccgcttgtatttgcccgaaattaattcg
cgtaacggtatgcgtaaaaaagctgctgaacgtgctgcggtaaacgcgccaatgcaagga
accgctgccgacattattaaaaaggcaatgattgcggttgctcaatggctagatactcaa
cccagtgagcattgtaagatgttaatgcaggttcacgatgaactggtatttgaagtatta
gaaagcgagttggataaagttgtaccgaagcttaccgagctgatggagcaggcagtgaca
ctagatttaccactcgttgccgaatcaggtattggtgaaaactgggatgaagctcactag
DBGET
integrated database retrieval system
