Agarivorans sp. B2Z047: LQZ07_23750
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Entry
LQZ07_23750 CDS
T08685
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQZ07_23750 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agq03400
]
LQZ07_23750 (mutM)
Enzymes [BR:
agq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LQZ07_23750 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LQZ07_23750 (mutM)
DNA repair and recombination proteins [BR:
agq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LQZ07_23750 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
HscB_4_cys
zf-C2HC_3
Motif
Other DBs
NCBI-ProteinID:
UQN42751
LinkDB
All DBs
Position
complement(5132297..5133109)
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AA seq
270 aa
AA seq
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MPELPEVETSRRGISPHIEKQVISEIVVRQPKLRWPVPELIQCCVGLAILSVTRRAKYLL
LETEAGHIIIHLGMSGSLRIVEQGLAAEKHDHVDIVLANGKVLRLNDPRRFGCVLFSQLP
VEQHNLLVNLGPEPLHDEFSAKYLIEQASKRSVAIKQFIMDNKVVVGVGNIYANEALFRT
GIHPKRAANKVSKVRLEMLTDNIKQVLAEAIEQGGTSLKDFTNADGKPGYFKQTLAVYGR
EGEACDTCGELIKALRIGQRNTFFCPHCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaggtagaaaccagccgtcgcgggattagcccgcatatcgaaaaa
caagtgattagcgaaatagtggttcgccaacctaaattacgttggccagtgcctgagttg
atccagtgctgtgtgggtttagctattttgtcggtaacgcgacgggctaagtatttgctg
ctggaaactgaagctggccacatcattattcacttgggcatgtcgggtagtttgcgaatt
gttgagcaaggcctagcagccgaaaagcatgaccatgtagatatagtattagcaaatgga
aaagtgcttaggcttaacgatcctcgtcgttttggctgtgtattgtttagtcagctaccc
gttgagcaacataatttgttggttaatttggggccagagcccttacatgatgagttctca
gctaagtatttaattgagcaagccagcaagcgaagtgtggcgattaagcaatttattatg
gataacaaagtggtcgtgggcgtaggtaatatctacgccaacgaggctttatttagaacg
ggcatccatcctaaacgtgctgctaacaaagtgagcaaagtgcgcctagagatgcttacc
gacaacatcaaacaagtgttggcggaagccattgaacaaggtggcactagccttaaagat
tttaccaatgccgatggcaagcctggctactttaagcagaccttagcggtatatggccga
gaaggcgaagcttgcgatacttgcggggagctgattaaggcattacgtattggccagcgc
aataccttcttttgcccacattgtcagcgctag
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