Agrobacterium tumefaciens H13-3: AGROH133_02818
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Entry
AGROH133_02818 CDS
T01432
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agr03032
]
AGROH133_02818 (gyrB)
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_02818 (gyrB)
Enzymes [BR:
agr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AGROH133_02818 (gyrB)
DNA replication proteins [BR:
agr03032
]
Prokaryotic type
DNA Topoisomerases
AGROH133_02818 (gyrB)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AGROH133_02818 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADY63009
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Position
circular:8124..10559
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AA seq
811 aa
AA seq
DB search
MTETSSSEVGANTEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADLVTVTLNADGSVTVTDNGRGIPTDIHSSEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLRIRRNGKLHEIGFTHGVADAPLSVIGEYEGRSGTEVTF
LASPDTFTMTDYDFGTLEHRLRELAFLNSGVRIVLTDKRHSDIKQEELLYDGGLEAFVRY
LDRAKKPLVDKPVAIHGEKDGITVEVALWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQMTSYAETSGIMKREKVSLQGEDCREGLTAILSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWLEEHPSDAKILVGKVVEAAIAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSELFLVEGDSAGGSAKQGRSRETQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTSIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVTRGKSVQYLKDEKALEEYLISMGIEDTSLTLGSGEVRIGADLREVILDAVR
MRTLIDGLHSRYSRSIVEQAAIAGALNPELSADAARAQETVAEVARRLDMIAEETERGWS
GLVLEDGGLRFERMVRGVKEISTLDMGLIGSVDARHIDQLAARTRDIYVTPPVLQRKDGT
MELAGPRALLDAIFAAGRKGLSMQRYKGLGEMNAEQLWETTLDANVRSLLQVKVNDATDA
DGLFSRLMGDEVEPRRDFIQENALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacatcgtcaagcgaagtcggcgccaacactgaatacggagccgattcgatc
aaggtcctcaagggtcttgatgctgtgcgcaaacggcccggcatgtatatcggcgatacc
gatgacggctccggtctgcatcacatggtctacgaggtggtcgacaacgccatcgacgag
gcgcttgcgggtcatgccgatctggtgacggtgacgctcaacgccgatggttcggtgacg
gtaacggacaacggacgcggcattccgactgatattcattcttccgaaggcgtttccgcc
gcggaagtcatcatgacccagcttcatgcgggcggaaaattcgaccagaactcctataag
gtttccggcggtctgcatggcgtgggcgtttcggttgtaaatgcgctctcggtttggctg
aagctcagaatccgccgcaatggcaagctgcacgaaatcggcttcacccatggggttgcc
gatgctccgctctccgtcattggcgaatatgaaggccgctccggtacggaagtcaccttc
ctggcgagccccgacaccttcaccatgacggattatgattttggtacgctggagcatcgc
ctgcgcgaactggcgtttttgaattccggtgttcgtatcgtgctcaccgacaagcgtcat
tctgatatcaagcaggaagagttgctctacgatggcggtcttgaagccttcgtgcgttat
ctcgaccgcgccaagaaaccgctggtggacaagccggtcgccattcatggcgaaaaggac
ggcatcacggttgaggtcgcgctctggtggaacgacagctaccacgaaaatgtgctctgc
ttcaccaacaacattccgcagcgcgacggcggcacccatatggccggcttccgcgcggcg
ctgacgcgtcagatgacgtcctatgccgagacttccggcatcatgaaaagggaaaaggtc
agcttgcagggcgaggactgccgcgaaggactgacggcaattctttccgtcaaggttccc
gaccccaagttttcttcgcagacgaaggacaagctcgtttcgtccgaagtgcgccctgtc
gtggaaagtctcgtcaatgaggccctgtccacctggctcgaggaacatccgtccgacgcg
aagattcttgtcggcaaggtggtggaagcggccattgcccgtgaagccgcccgcaaggcg
cgcgaactgacgcgccgcaagggtgcgctcgatatcgcctctctgcccggcaagctcgcc
gattgttccgaacgcgatccggcgaaatccgaactcttcctcgtcgagggtgactccgca
ggcggttcggccaagcagggccgctcgcgcgaaacgcaggccatcctgccgctacgcggt
aagatcctgaacgttgagcgcgcccgtttcgacaagatgctgtccagccaggaaatcggc
acgctgatcaccgcgctcggcacgtcgatcggcaaggacgaattcaacgcagacaagctg
cgctaccacaagatcatcatcatgacggatgctgacgtcgacggcgcccacattcgtacc
ctgctgttgaccttcttcttccgccagatgccggaactgatcgagcgtggccatctctat
atcgcccagccgccgctttataaggtgacgcgcggcaaatccgtgcagtacctcaaggac
gagaaggctctggaagaatatctgatctcgatgggcatcgaggatacgtcgctgacgctc
ggctccggcgaagtacgcatcggcgctgaccttcgtgaggtcattctcgatgcggtgcgc
atgcgcacgctgatcgacggtctgcattcccgctacagccgctccatcgtggaacaggcc
gccattgcgggtgccctgaaccccgagctttcggccgatgctgcccgtgcccaggaaacc
gttgccgaagtggcccggcgtctggacatgatcgcggaagaaaccgaacgcggctggtcc
ggcctggtgctggaagatggcggcttgcgcttcgagcgcatggtacgcggtgtcaaggaa
atctcgacgctcgatatgggcctgatcggttcggtcgatgcccgtcatatcgatcagctg
gcggcccgcacgcgcgatatttacgtcactccgccggttctgcaacgcaaggacggcact
atggaactggccggaccgcgtgcgcttctggatgctattttcgccgccggccgcaagggt
ctttccatgcagcgttacaagggtctcggtgaaatgaacgccgagcagctgtgggaaacc
acactcgacgccaatgtacgttcgctgctgcaggtcaaggtcaacgatgcgacggatgcc
gatggtctgttttcgcgcctgatgggcgatgaggtggaaccgcgccgcgacttcattcag
gaaaatgcgctcagcgttgccaatctcgacatttaa
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