Agrobacterium tumefaciens H13-3: AGROH133_02829
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Entry
AGROH133_02829 CDS
T01432
Symbol
addA
Name
(GenBank) ATP-dependent DNA helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_02829 (addA)
Enzymes [BR:
agr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGROH133_02829 (addA)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AGROH133_02829 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ADY63020
LinkDB
All DBs
Position
circular:complement(20094..23651)
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AA seq
1185 aa
AA seq
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MMIDPIDHGPATDTPQSWIDWTSDRQRLASDPASSAWVSANAGSGKTHVLTQRVIRLLLA
GCRPSAILCLTYTKAAASEMSSRVFDRLAEWATLPDNDLGDRVAAIEGKMPDRIKLAEAR
RLFAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATTLLAEARRSLLT
AVSTEGDTDLTQSLAYVLDLADESGLESLLTAIIANRSALRAFLIDAKQADGIDAQLRQA
MQIDAGETEETAAAAFWPLPGLSGLSLDTYLTLADEVGGSRVIDVAYALREAKRQTDSVR
RMEFIEAALLTAKGEKKSDAYVINKGMQKSAPDLVDALTLARDHVVACRNRYRLVRMLEA
TKCALVLAERLIGDFEDLKKQRSQLDFEDLIERAANLLNRDTAGAWVHYKLDQGIDHILV
DEAQDTSPVQWSIIQSLAADFFSGESARMGRRTLFAVGDEKQSIYSFQGARPERFSQERD
ETKRRVDSVEQAFHRIRLPLSFRSTEDVLAAVDQVFSDPKNASGLSADNEPVEHRSNRAG
HPGTVEVWDMVAPETAEDEEDWTAPFDALRESAPATIVARRIAARIAGMIGNQTIIEKGV
ERAIEPGDILVLVRKRHAFVNALTRELKRRKNIPVAGADRLRLTDHIAVQDLLALGRFVV
LPEDDLSLAALLKSPLFNLSEDDVFDVAATRSDTESVWQRLQTLSQDENSRFSVVANKLK
NFIALSKTATVHDFFAAVLTLHDGRKKFLGRLGNEASDVLDEFLSFALDHERTGLPGLQA
FLSVLETDSPEVKREQDKDRGEVRIMTVHASKGLEAPVVFVVDGGSKAFNHSHVPKLRFV
EADGDAFPVWLPGSGFSNHLIRADEERLKTAAEDEYRRLLYVAMTRAADHLVVCGYRGQK
ENPECWHAIVKTALADNEKHCQPQQFMADGEEWQGLVWRKSDARSTPAPQRLPEPQTQEE
YALPAGLLTPLPALPSLPRPLSPSGAGTIIDDGADDLAVRSPLFGEKADVSSLALQRGRL
VHRMLQALPDFAESEREEAARRYAERAARFWPSAEREHLIRAVLRVMSEPAVQPAFSPNS
RAEVSIMGTMTIGRQHYAVSGRIDRLAVDGDRVILVDYKTNRVPPRDAHEIPFSHTAQLA
IYREILSPLYPGKEFVCALIYTENAAFMTVGDDAMMQALAAIKTK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgaccctatcgatcacgggcctgccacggacaccccgcaaagctggatagac
tggacgagcgaccggcagcggctcgcctccgatccggcaagttccgcctgggtttcggcc
aatgccggttccggcaagacccatgtgctgacccagcgcgtcatccgcctgcttctggcc
gggtgccgaccctccgcaattctgtgcctcacctataccaaggcagcggcgtccgaaatg
tcgagccgcgttttcgaccgtctggcggaatgggctacgttgccggataacgatcttggg
gatcgcgtcgctgccatcgaaggaaagatgccggatcgcatcaagctggccgaagcgcgg
cggctgttcgccaaggcgctggaaacgcccggtgggctgaagatccagacgatccacgcc
ttctgcgaagccttgttgcatcagttcccgctggaggccaatgtcgccggccacttctcc
gtccttgatgaccgcgccgcaacaaccctgctggccgaggcacgtcggtcgcttttaacg
gcggtttcgacggagggagacaccgatctcacgcagtctctcgcttatgtgcttgatttg
gcggacgaaagcgggctcgaatcgctactcaccgccatcatcgccaatcgcagcgccctt
cgtgcctttttgatcgatgcaaaacaggctgatggcatcgatgcccaattgcggcaggca
atgcagatagacgcgggtgaaaccgaagaaacggcagcggcggcattctggcccttgcca
ggtctctcggggctttccctcgatacctatctgacgcttgccgatgaagtgggcggatcg
cgcgtcatagatgtcgcttatgccctgcgggaagcgaaacggcagacggattccgtgcgg
cgcatggaattcatcgaagctgcgctgttgacagccaagggcgagaaaaaatccgatgcc
tatgtcatcaacaagggcatgcagaaatccgcacccgatctcgtcgacgcgctgacgctt
gcgcgggaccatgtcgtggcctgtcgcaaccgctatcgtctggtgcgaatgctggaggcg
acgaaatgcgcgcttgttctggctgagagactgatcggcgatttcgaggatctgaaaaag
cagcgaagccagctcgattttgaggatctgatcgagcgcgccgccaatctcctcaaccgc
gatacggcgggcgcctgggtacattacaagctagatcagggtatcgaccatatcctcgtc
gatgaggcgcaggataccagccctgtgcaatggtcgatcatccagtcgctggcggcggac
ttcttcagcggcgagagcgcccgcatggggcggcgcacgctttttgccgtcggtgatgaa
aagcaatcgatctattcgttccagggcgcgcgaccggagcggttttcgcaggagcgcgac
gagaccaaaaggcgtgtcgattcggtggagcaggcatttcaccgcatccgcctgccgctg
tccttccgttccacggaagatgtgctggccgccgtcgatcaggtcttttcggaccctaaa
aatgccagcggcctcagcgccgataacgagccagtcgaacaccgctccaaccgcgccggc
caccccggcaccgtggaagtctgggatatggtggcgccggaaaccgccgaggacgaagaa
gactggacggcgcctttcgatgcacttcgggaaagcgcgccggccaccatcgttgcccgc
cggatcgccgcgcgcattgccggcatgatcggcaaccagacaatcatcgaaaagggcgtg
gaacgcgctattgagcccggcgatattcttgtgttggttagaaaacgccatgctttcgtc
aatgcgctgacccgtgagctgaaacggcgcaagaacattcccgtcgccggtgccgaccgt
cttcgcctgaccgatcacatcgccgtgcaggaccttctggcgcttggccgttttgtcgtg
ctgcctgaggatgacctttctctggccgcgctgttgaaaagcccgcttttcaatctctcc
gaagacgatgttttcgacgtcgctgccacgcgatccgatacggagagcgtgtggcaaaga
ttgcagacgctttcgcaagacgagaacagccgcttctccgtagtcgccaacaagctcaag
aactttatcgcgctttcgaaaacggcaacggtgcatgatttcttcgctgcggttctgacc
ctgcatgacgggcgcaaaaaattcctgggtcgtctcggcaacgaggcgagcgatgttctg
gacgagttcctgtcctttgcgcttgaccatgaaaggaccggcttgcccggcctgcaagcc
ttcctatccgtcctggaaacggattcgccggaggtgaaacgcgaacaggacaaggatcgc
ggtgaagtgcggatcatgaccgtgcacgcctccaagggtcttgaagcgccggttgttttt
gtggtcgatggcggttcgaaggccttcaaccacagtcatgtcccgaaactgcgcttcgtt
gaagcagacggggatgccttccccgtctggctgcctggcagcggtttttccaatcatctc
attcgcgccgatgaggaacgcctgaagacggccgcggaagacgaatatcgtcggctgctt
tatgtggcgatgacacgtgccgccgatcatctggtcgtttgcggttatcgcggccagaag
gaaaatcccgaatgctggcacgccatcgtcaagacagcacttgccgacaatgaaaagcac
tgccagccgcaacagtttatggccgatggtgaagagtggcaggggcttgtctggcgcaag
tccgatgctcgttcgacccccgctccgcaaaggctgcctgaaccacagacgcaagaagaa
tatgctctcccggcggggcttcttacccccttgcccgccctgccatcattgccgaggcca
ctcagcccttccggcgcgggcaccatcattgatgacggtgcggacgatcttgccgtgcgt
tcgccgctttttggcgaaaaagccgatgtctcctcgttggcattgcaacgcggtcggctg
gtgcatcgcatgctgcaggccctgccggattttgccgagagtgagcgggaagaggcagct
cgccgttatgccgaacgtgccgcacggttctggccgtctgccgagcgcgaacatctgata
cgggcggttttgcgggtcatgtccgaaccagcggtgcagccggcattttcgcccaatagc
cgcgcagaagtttccattatggggaccatgacgatcggcaggcagcattatgcggtttcc
ggccgtatcgaccggctggcggtggatggcgaccgcgtcattctggtcgactacaagacg
aaccgcgtgccgccgcgcgacgcgcacgagatacccttctcccacacggcacagcttgcc
atctatcgcgaaattctgtcaccgctttatcccggcaaggaatttgtctgcgcgctgatt
tatacggaaaatgccgcttttatgacggttggtgacgatgccatgatgcaagcccttgcc
gcaataaagacaaagtga
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