Agrobacterium tumefaciens H13-3: AGROH133_02924
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Entry
AGROH133_02924 CDS
T01432
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agr03016
]
AGROH133_02924 (truB)
Enzymes [BR:
agr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AGROH133_02924 (truB)
Transfer RNA biogenesis [BR:
agr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AGROH133_02924 (truB)
Prokaryotic type
AGROH133_02924 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADY63073
LinkDB
All DBs
Position
circular:complement(86989..87936)
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AA seq
315 aa
AA seq
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MSKPRKQQNRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFTVTWGEERATDDLEGEVVNSSDQRPDEQAIRDILPN
YTGVIMQTPPQFSAIKIAGERAYDLAREGETVEIPAREVEIHRLTLLACPDADTAHFEVE
CGKGTYVRALARDMGRDLGCFGHISQLRRTMVAPFGEDMMVPLETLTALEAIEDRDERLE
ALDAFLIDTAEALSSLPHLIINDDQAHRLKMGNPILLRGRDAPANHPEAYATAHGKLIAI
GEIGEGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacagcagaaccgcaaacccaagggccgcccgatttcgggctgg
ctcattctcgacaagccgctcgatttcggctcaaccgaagccgtttccaagatcaaatgg
ctgttcaacgcccagaaggcaggtcacgccggaacgctcgaccccttggcgtccggcatg
ttgccgattgcactcggtgacgccaccaagaccgttccttacgtcatggacggccggaaa
atctacgagtttaccgtcacctggggtgaagaacgcgcaaccgacgatctggaaggcgag
gttgtcaactcctccgaccagcgcccggacgaacaggcgatccgcgatattctgcccaat
tataccggcgtgatcatgcagacgccgccgcagttttccgccatcaagattgccggtgag
cgggcctatgatctggcgcgtgaaggcgaaacggtggagattcccgcgcgcgaggtggaa
attcaccgtctgacgctgctcgcctgccccgacgctgacaccgctcatttcgaagtggaa
tgcggcaagggtacctatgtgcgggcgcttgcgcgcgacatgggccgggatctcggctgt
ttcggtcatatttcgcaattgcgccgtaccatggtcgcgccattcggcgaggacatgatg
gtaccgctcgaaaccttgacggcgctcgaagccatcgaagaccgcgacgagcggcttgaa
gcgctcgatgcttttctgatcgacacggcggaagcgctttcatcccttccccacctcatc
atcaatgatgatcaggcacaccggctgaagatgggcaatccgatcctgctgcgcgggcgt
gatgcgccggccaatcacccggaggcctatgccactgcgcatggcaagctcattgccatc
ggagagatcggcgagggcgaattccggccgaagcgcgttttcggttga
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