Agrobacterium tumefaciens H13-3: AGROH133_02946
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Entry
AGROH133_02946 CDS
T01432
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03030
DNA replication
agr03430
Mismatch repair
agr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGROH133_02946 (dnaX)
03430 Mismatch repair
AGROH133_02946 (dnaX)
03440 Homologous recombination
AGROH133_02946 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agr03032
]
AGROH133_02946 (dnaX)
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_02946 (dnaX)
Enzymes [BR:
agr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AGROH133_02946 (dnaX)
DNA replication proteins [BR:
agr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AGROH133_02946 (dnaX)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AGROH133_02946 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
RuvB_N
AAA_19
AAA_24
AAA_18
TsaE
SRP54
AAA_assoc_2
DUF815
SKI
ABC_tran
VapE-like_dom
AAA_2
RNA_helicase
CbiA
AAA_33
Rad17
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADY63084
LinkDB
All DBs
Position
circular:complement(99269..101146)
Genome browser
AA seq
625 aa
AA seq
DB search
MSDTLPTTSSESQGGTGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTDTIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISAADLVGLFTAIAGKEGFEAEPQALSMIARAAEGSARDGLSL
LDQAIAHGGGRVEAEAVRGMLGLADRARIVDLFQHIIKGDVAAALSEFNGQYEAGANPVV
VLNDLADFTHLVTRMKYVPDAAEDPSLSEIERVRGAEFAETIAVTALSRIWQMLLKGIPE
TENASRPAGAAEMVLIRLSHAANLPAPEDAARRLLELSNSDGGYSNGAPSGGGNGGGARA
YSSGQTVAAGRPVELPAQRPASSQPSTMLRAVPDSRPQEMQVAAPKTEERPEPKVPVNSL
QDIADLCQKNRDPVMRAKVRNFVRLVRLEPGRLDMRLGDGAPGSLPGELGVKLKEWTGIH
WIVSLSKEQGQPTLVEAEGSARDARLVDARQDPDVAAILQQFPGAKITDVRIRVTQQDEP
DEIAPPPSVAESSEGDILPGDDIEF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccttacccaccacatcaagcgaatcccagggcgggaccggctaccgggta
ctggcacgcaaatatcgtccgaaggatttttccgatctgatggtcggccaggagccgatg
gtccgcacgctgacgaatgcgttcgagaccggccgcatcgcgcaggcctatatgctgacc
ggcgttcgcggtgtgggcaagacgaccaccgcgcgtattcttgcccgtgcgctgaactac
aagaccgacaccatcgacaaaccgaccatcgacctgcgtatccccggcgaacattgtcag
gcgatcatggaaggccgtcatgtcgacgtgatcgagatggacgccgcctcccataccggt
attgacgacattcgcgagatcatcgagcaggtgcgttaccgcccggtttcggcgcgctat
aaagtctatatcatcgacgaagtgcacatgctctcgacgcaggccttcaacggtcttctg
aagacgttggaagagccgccggagcatgtgaaattcatcttcgcaaccactgaaatccgc
aaggttccgatcaccgtgctgtcgcggtgccagcgcttcgacctgcgccgcatcagcgcc
gccgatctcgtcggcctgttcactgccattgccggcaaggaaggtttcgaggccgaaccg
caggcgctctcaatgattgcccgcgcggctgagggttccgcccgtgacggtctttccctg
ctcgatcaggcgatcgcccatggcggcggacgcgtggaagccgaggcggtgcgcggcatg
ctgggtcttgccgaccgggcgcgcatcgtcgatcttttccagcacatcatcaaaggtgat
gtcgcggcggcactttcggaattcaacggtcaatacgaggcaggcgccaaccccgtcgtc
gtgctgaacgaccttgccgatttcactcacctcgtcacccgcatgaaatatgtgccggat
gcggcggaagatccctcgctgtccgagatcgaacgcgtgcgtggcgcggaatttgccgag
acaatcgccgtgactgcgctgtcgcgtatctggcagatgctgctcaagggtattccggaa
actgaaaatgcctcacgtcctgcgggtgcggccgaaatggtgttgatccgcctttcccat
gccgccaatcttccggcaccggaagacgcggcgcggcgcctgctcgaactttccaacagc
gatggcggctattccaatggcgcgccttcgggtggcggcaatggcggaggtgcgcgcgcc
tattcctcaggacagacagtggccgcaggaagacctgtggagcttcctgcccagaggccg
gcaagctcgcagccttcgaccatgctgcgcgccgtgcctgacagccgcccgcaggaaatg
caggtcgcggcaccaaaaaccgaagaacggccggagccgaaggttcccgtcaactctctt
caggacattgccgacctgtgccagaaaaatcgcgatcccgtcatgcgggcgaaggttcgc
aacttcgtgcggctggtgcggctggagccgggccggctcgacatgcgcctcggcgatggc
gcacccggatcgctccccggcgagcttggcgtgaagctgaaagagtggaccggtatccac
tggatcgtcagccttagcaaggaacagggtcagccgacgctggttgaagccgagggtagt
gcgcgcgacgcccgcctcgtggatgcgaggcaggaccctgacgtggcagccattcttcaa
cagtttccaggtgcaaaaatcaccgacgtgcgcattcgcgtcacccagcaggacgagccg
gacgagatcgccccgccgccttcggttgccgaatcgagcgagggcgacatccttcccggc
gacgatatcgaattttaa
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