Agrobacterium tumefaciens H13-3: AGROH133_02970
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Entry
AGROH133_02970 CDS
T01432
Symbol
dctD
Name
(GenBank) two component response regulator
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AGROH133_02970 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
agr02022
]
AGROH133_02970 (dctD)
Two-component system [BR:
agr02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
AGROH133_02970 (dctD)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
FleQ
AAA_16
HTH_50
AAA_2
TadZ_N
AAA
AAA_22
AAA_3
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ADY63101
LinkDB
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Position
circular:118994..120340
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AA seq
448 aa
AA seq
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MTMSRVLLIDDEEELRFSTAQALELSGFAVTMLASAEHALELIGYSFDGVVVSDIRMPGM
DGMTLLQKVRELDPEIPVILMTGHGDVQLAVNAMRNGAYDFIEKPFTPQYLAGIIKRAND
RRALVLENRRLKAVAGKHDDLETRLPGRTQVMVDLRYRIRAIGATDADTLIVGDTGAGKE
VVARALHDISARANRPFVAINCAALPQTLIESELFGHEAGAFPGALRPRYGKFEHARGGT
ILLDEIGSMPFELQGRFLRVLQERVITRLGSNETVELDVRFIATSKVDLEQEVAAGRFRA
DLLYRLNVATILVPSLSQRSADIPLLFLHLVREAAARYGREDMDVPQHLLSVISLREWPG
NVRELRNAADRFVLGLESDVSETSLPFEGDGKAALAARVAAYEKSLIARAIAAHGGNLKS
VYESLGISRKTLYEKMQKYELHRHMTEV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtcgcgggttctgttgattgatgacgaggaggaactgcgcttttccaccgcg
caggcgctggaactttccggttttgcggtcaccatgctggcaagcgccgaacatgcgctt
gaactcatcggctacagcttcgatggcgtcgtggtcagcgatatcaggatgcccggcatg
gatggcatgacgctgctgcagaaggtgcgggagcttgacccggaaatacctgtcatcctg
atgacgggccatggcgatgtgcagcttgccgtcaatgccatgcgcaacggtgcttatgac
ttcatcgaaaagcccttcaccccgcaatatctcgccggcatcataaaaagagccaacgac
cggcgggcactggtgctggaaaaccgccgcctgaaggcggtggcgggcaagcatgacgat
ctcgaaacgcgtctgcccggcagaacccaggtcatggtcgatctgcgttaccgcattcgc
gccatcggtgcgacggatgccgatacgctcattgtcggcgataccggtgcgggcaaggaa
gtggtggcgcgcgcacttcacgatatcagcgccagagccaaccggccctttgtcgccatc
aattgtgccgcccttccgcaaacgctgatcgaaagcgagctgttcggccacgaggctggc
gcttttcccggcgcgctgcgcccgcgctacggcaagttcgagcatgcccgcggcggcacc
atattgctggacgagatcggctccatgccctttgaattgcagggccggttcctgcgcgtc
ttgcaggaacgggtgatcacccgtcttggctccaatgaaacagtcgagctcgacgtccgc
ttcatcgccaccagcaaggtcgatctggagcaggaagtcgcggcagggcggttccgtgcc
gatcttctttaccgcctgaacgtggcgacgattctcgtgccgtccctctcgcagcgcagt
gccgacataccgctgcttttcctgcatctggtgcgggaggctgctgcccgttacggtcgg
gaagatatggacgttccgcagcatctactctcagtcatttccctgcgtgagtggccgggc
aatgtccgggaattgcgtaatgcggcggaccgtttcgttctcggtctggaaagcgatgtc
tccgaaacctcgctgccgtttgagggcgatggcaaggcggcgcttgccgcaagggtcgcc
gcttatgaaaaaagccttattgcgcgcgcgatcgccgcccacggcggaaatctgaaatcc
gtctatgagagcctcggcatttcacgcaaaacgctttacgaaaaaatgcagaaatacgag
ctgcaccggcacatgaccgaagtgtga
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