Agrobacterium tumefaciens H13-3: AGROH133_03377
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Entry
AGROH133_03377 CDS
T01432
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AGROH133_03377 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_03377 (xseA)
Enzymes [BR:
agr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AGROH133_03377 (xseA)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AGROH133_03377 (xseA)
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Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ADY63249
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All DBs
Position
circular:262509..264113
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AA seq
534 aa
AA seq
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MSDIFSNAALSNLAEFSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIESLEPAGAGALMAL
LEDRRRRLAAEGLFDAERKRRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV
KVQGEGSGEEVANAIRGFNALQPGGEIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAES
EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQ
MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLEMTTLNKRRAFERSASGLRP
EILLNGLRQHRQRVTERMQRAEALVERRLLQAQSRISSTDSALRSLPARLLGQLERQKER
VVTATRRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLTRAAAI
ASGAVVSMEFADGRVAALTTGEATPSSDVQTPAAPKKKPVKPASSDPGNQGSLF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattttctccaatgccgcattgagcaatcttgccgagttctcggtttccgaa
ctgtcgggttccatcaagcgaacggtggagacggctttcgatcaggtgagggtgcgcggc
gagatttccggctaccggggtccgcattcttcgggtcacgcctatttctccctgaaggac
gatcgcgcccgcatcgatgcggttatctggaagggtactttctcgcggctgaagttccgc
ccggaagagggcatggaggtcatcgccaccggcaaggtcaccacctttcccggctcctcg
aaatatcagatcgtcatagaaagcctggagccggccggcgcgggcgcgctgatggctttg
ctggaggaccgccgccggcgtctggcggcggaggggctgttcgatgcggaacgcaaacgc
cgcctgccgttcatgccgcgtgtcatcggtgttgtcacatcgcccacgggcgcagtcatt
cgcgatattctccaccggatttcggatcgctttccggtccatgtcgtcgtctggccggtc
aaggtgcagggggaaggctcgggtgaggaagtggcgaacgccattcgcggtttcaatgcg
cttcagcccggcggtgagattgcacgccccgacgtgctgatcgtcgcccgtggaggcggc
agtctggaagatctctggagcttcaacgacgaaatcgtcgtgcgcgccgctgccgagagc
gaaatcccgctgatttccgctgtggggcatgagacggatacgaccctgatcgactacgcc
gccgacgtgcgcgcaccgacaccgacgggtgccgccgaaatggccgtgccggtgcgtgcg
gaactggaggcgcagctctccggccttgcggcgcgcctttccggctcggtatcacgccaa
atggacaatcgccgacagggcgtgcgtgctctggtgcgtgcgctgccatcgcttgaccag
cttctggctctgccgcgccgtcgtttcgacgaggccgcaagcggtttgggtcgcgggctt
gaaatgacgacgctgaacaagcgccgcgcgttcgaacgctctgcttcgggtctgaggccg
gaaatcctgctgaatggtctgcggcagcatcgccagcgtgttacggaacgcatgcagagg
gccgaggcgcttgtggagcgccgcctgttgcaggcacagtcgagaatttcctcgaccgat
tccgcgctgcgttcgctgccagcccgcttgctcggccagttggagaggcagaaggaacgg
gtcgtcaccgcaacgcgacgtgccgataccgccgtgcttcaccgcatggcgcagaaccgc
tcgggccttgctgcccatgaccgcatcctgcagtcgctgtcctacaagaatgtgttgaac
cgcggttatgctgtcatccgcgacgaggagaaccggcccctgacccgggctgctgccatc
gcgtccggcgctgtggtgtcgatggagtttgccgacggtcgcgtggccgccctgacgaca
ggcgaggctactccatcatctgacgttcagacgcctgccgctcccaaaaagaagccggtg
aaaccggcctcttccgacccgggaaatcagggcagtctgttctga
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