Agrobacterium tumefaciens H13-3: AGROH133_03574
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Entry
AGROH133_03574 CDS
T01432
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00300
Lysine biosynthesis
agr01100
Metabolic pathways
agr01120
Microbial metabolism in diverse environments
agr01230
Biosynthesis of amino acids
Module
agr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AGROH133_03574 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agr01002
]
AGROH133_03574 (dapE)
Enzymes [BR:
agr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AGROH133_03574 (dapE)
Peptidases and inhibitors [BR:
agr01002
]
Metallo peptidases
Family M20
AGROH133_03574 (dapE)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ADY63348
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All DBs
Position
circular:complement(359426..360622)
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AA seq
398 aa
AA seq
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MTTTDPVANLAALIRCPSVTPAEGGALSLLDTLLSPLGFAVEKMVATEAGTPDVENLYAR
LGTEGPHLMLAGHTDVVPVGDEAAWSHPPFAAEIAGGEMFGRGAVDMKGGIACFVAAIAR
YIEKHGKPKGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGEMI
KIGRRGSISGRITVHGVQGHAAYPHLADNPIRGLLQLTHALMYPPFDHGTDDFQPSNLEV
TTIDTGNAATNVIPARATASFNIRFNDSWTVESLRAEIIRRLDAAAAEGELRPDRSPVKY
EIVWADRPAHVFLTRNNALISSLSGAVEAVTGKEPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVEIADLETLTRIYETFIERWFSHADGK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgatcccgttgcaaatctcgccgccctcatccgttgcccttcggtgacg
cccgccgaaggtggcgcgctatcgctgctagacaccctgctttcaccgcttggctttgcg
gtggaaaagatggtggcgacggaagcgggaacgcctgacgttgaaaacctctacgcccgg
cttggcacggaaggcccgcacctgatgcttgcgggccataccgatgtcgttccggtgggc
gacgaggcggcatggagccatccgccctttgccgctgaaattgccggcggcgaaatgttc
ggccgtggtgcggtggacatgaagggcggcattgcctgtttcgttgctgccattgcccgc
tacatcgagaaacacggaaaaccgaaaggttccgtttctttcctgatcaccggtgacgag
gaaggcccctcgatcaacggcacctccaagttgctggaatgggccgccgccaaaggcgag
acatgggatgcctgcgtggttggtgaaccgaccaaccccgaccagctgggcgaaatgatc
aagatcggccgccgggggtcgatttcgggccgcatcaccgtgcatggcgtgcagggtcat
gccgcatatccgcatctggccgacaaccccattcgcgggctgctgcaactgacccacgcg
ctgatgtatccgcccttcgatcacggcactgacgacttccagccgtccaatctggaagtg
acgaccatcgacaccggcaatgccgccacaaatgtcattccggcacgggcgacggcgtcg
ttcaacatccgtttcaatgacagctggacggtggagagcctgcgggcggaaatcatccgc
cgcctcgatgccgccgctgccgagggagaacttcgtcccgaccgcagcccggtcaaatat
gagatcgtctgggcggaccgtccggcccatgttttcctgacccggaacaatgcgctcatc
tcatcgctttccggcgccgtggaagccgtgacaggcaaggagcccaagctttcgaccacc
ggcggcacgtctgatgcgcgtttcatcaaggattattgccccgtcgtggaattcggcctc
gtcgggcagaccatgcatatggtcgatgagcgcgtggaaatcgccgatctggagacgctg
acacgcatctacgagaccttcatcgaacgctggttctcccatgccgacggcaagtga
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