Agrobacterium tumefaciens H13-3: AGROH133_04235
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Entry
AGROH133_04235 CDS
T01432
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agr03009
]
AGROH133_04235 (rluB)
Enzymes [BR:
agr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AGROH133_04235 (rluB)
Ribosome biogenesis [BR:
agr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AGROH133_04235 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADY63617
LinkDB
All DBs
Position
circular:644581..646557
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AA seq
658 aa
AA seq
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MTFKDKPKRDGGKTFSRDKKPKGPGKPAAEREKKPVEAKAAPVQEAVMGTKPERISKIMA
RAGVASRRDIERMIMEGRVSLNGVKLDTPVMNATLSDKIEVDGMPIRGAERTRLWLYHKP
AGLVTTNSDPEGRPTVFDNLPGELPRVLSIGRLDINTEGLLLLTNDGGLSRVLELPTTGW
LRRYRVRAHGEVDQAALDKLKEGIAVDGVLYGAIDATLDRTQGHNVWITMGLREGKNREI
KNVLGALGLEVNRLIRISYGPFQLGDLPEGKVLEVRGRMLRDQLGPRLIEQSGANFDAPI
YDAPVADDEEENTPKRAPRSEWAKSDAPEGKPRFDRAAGKPEDRREKALGRLDTKRGDKP
AGKFGGKPAGKFGAKTRGEEDGEERRPARPPAGTSRTANVWMAPGAKPTRDGKERKFSAR
AEAESLFKKPSAQAEARRNVVRHADSEGEWIRSDSPREEEGGRGRGDGPRGGKSFGDRGG
KSFGDRPFRDKPREAGDRPRGDGPRGEKSFGDRTARGGKPFGDRPFRDKPREEGDRPRSD
RPRGEKSFGDRTARGEKPFGERPFRDKPREDGDRPRGDRPFGDKPRGAKSGGKPGGRPAS
GKPSFGKPGERGERSGFSGKGKGPGGGSGPGGGKPGGKGPGGKPSGGRGMTRNADRRR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaaagacaagccgaagcgtgacggtggcaagacttttagccgcgacaagaag
ccgaaaggccccggcaagcccgccgcagagcgtgaaaagaaaccggtagaagccaaggcg
gctccggtgcaggaagccgttatgggcaccaagccagagcgcatttccaagatcatggcg
cgcgccggcgttgcctcgcgccgcgatatcgagcgcatgatcatggaaggccgcgtgtcg
ctgaacggcgtcaagctggacactccggtgatgaacgcgactctttccgacaagatcgaa
gtggatggcatgcccatccgcggggctgagcgcacgcgcctgtggctttaccacaagccc
gctggcctggtgacgaccaattccgacccggaaggccgcccgaccgttttcgacaatctg
ccgggtgaattgccgcgtgtgctctctatcggccgcctcgacatcaataccgaaggcctg
ctgctgttgaccaatgatggcggtctctcgcgcgtgctggaactgccgacgaccggctgg
ctgcgccgctaccgcgtgcgcgcccatggcgaggtcgatcaggcagcgctcgacaagctg
aaggaaggcattgccgtcgacggcgtgctttatggcgctatcgacgcgacgctcgaccgc
acccagggtcacaacgtctggatcaccatgggtctgcgcgaaggcaagaaccgcgagatc
aagaacgtgctcggcgcgctcggccttgaggtcaaccgcctgatccgtatctcctacggc
ccgttccagcttggcgatctgcctgaaggcaaggtgcttgaagtgcgtggccgcatgctg
cgtgaccagcttggtccgcgcctcatcgaacaatccggcgccaatttcgacgcgccgatc
tacgatgcgcctgtcgccgacgatgaagaagaaaatacgcccaagcgcgcgccccggtcc
gaatgggcaaagagcgacgcgccggaaggcaagccgcgtttcgacagggctgccggcaaa
ccggaagatcgccgcgaaaaggcgctcggccgtctcgacaccaagcgcggtgacaagcca
gccggcaagttcggtggcaaacctgccgggaaattcggcgcgaaaacccgtggcgaagag
gatggcgaagaacgccgccccgcccgcccgcccgcgggtaccagccgcacggccaatgtc
tggatggcgcccggcgcaaagcccacccgtgatggcaaggagcggaagttttctgcccgc
gcggaagcggaaagcctgttcaagaagccatccgcccaggcggaagcgcgccgcaacgtc
gtcaggcatgccgattccgagggcgagtggatccgttcggattccccgcgcgaagaggaa
ggcggtcgtggacgtggcgacggcccgcgcggtggaaagagctttggagatcgcggcggg
aaatccttcggtgaccgcccgttccgtgacaagccacgtgaagcgggagatcgcccgcgt
ggcgacggtcctcgcggcgagaagagcttcggagatcgcactgcacgcggtggaaaaccg
tttggcgaccgtccgttccgtgacaagccacgtgaggagggtgatcgcccgcgcagcgac
cgcccccgcggcgagaagagcttcggagatcgcacagcacgtggtgagaaaccttttggt
gagcgtccgttccgcgacaagccccgcgaagacggtgatcgcccacgcggcgaccggcct
ttcggtgacaagccaagaggcgcaaaatcgggtggaaaacccggcggcaggcccgcatcg
ggcaagccttcttttggaaaaccgggtgaacgtggcgaacgttcgggtttttcaggcaag
ggcaaaggccccggtggcggtagcggccccggcggtggcaaaccgggcggcaaaggcccg
ggtggcaagccttctggtggcaggggaatgacacgtaatgcggatcgtaggcggtga
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