Agrobacterium tumefaciens H13-3: AGROH133_04268
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Entry
AGROH133_04268 CDS
T01432
Symbol
kdgR
Name
(GenBank) Pectin degradation repressor protein kdgR
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agr03000
]
AGROH133_04268 (kdgR)
Transcription factors [BR:
agr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AGROH133_04268 (kdgR)
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GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
TrmB
HTH_20
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ADY63636
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Position
circular:665917..666756
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AA seq
279 aa
AA seq
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MPDHKNPNDSEHEVVPALERKKESVTGTLGKAVSLLELIALAEKPMRFTDVVEACGQPRG
TVHRQLAHLVAEGLVDHVADQTYVVGLRLLQLAAKAWSGNDLRSVAAPHLAALQEATQES
VHLAVLNGGQVTYLDKMEGKHTLRMHSQVGKTSPAYCTGVGKAALSMLSPDELAALAAEL
DFHRFTQNTIVTPQMLAQDVAAIRSNGYGFDLQEHEIGIHCVAAPVRAPGRNFLAAISVT
GPAYRVDVEQLRKWGPLVRETADQISAELACRLSPVANG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcacaaaaacccaaatgacagcgagcatgaagtggttcctgccttggagcga
aaaaaggaaagcgtaaccggcacgctcggtaaggccgtctcgcttctggagcttatcgcc
cttgccgaaaaaccgatgcgcttcaccgacgttgtcgaggcttgcggccagccgcgcggc
acggtgcaccgccagctcgcccatctcgtggccgaaggtctggtcgatcatgtcgccgac
cagacctatgtcgtgggtctgaggctgctgcaattggctgccaaggcctggagcggcaat
gatctgcgcagcgttgccgcgccgcatctggcggcattgcaggaggcgacgcaggaatcc
gtgcatcttgccgttctgaacggcgggcaagtcacctatctggacaagatggagggcaag
catactttgcgcatgcattcgcaggtgggcaagacatcccccgcctactgcacaggggtg
ggcaaggccgcgctgtcaatgctttcccctgacgaactcgctgcacttgccgcagagctg
gacttccaccgcttcacgcaaaatacgatcgtaaccccgcaaatgctggcgcaggatgtg
gccgccattcgcagcaatggctacggtttcgaccttcaggagcatgagatcggcattcac
tgcgttgccgcgccggtaagggcgccggggcgcaattttctcgcggcgatttccgtcacc
ggcccagcctatcgcgtggatgtagagcaactgcggaaatggggtcctctggtgcgcgaa
acggccgatcaaatttcggcggaacttgcctgcagattatctccggttgcgaatggttga
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