Agrobacterium tumefaciens H13-3: AGROH133_04341
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Entry
AGROH133_04341 CDS
T01432
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agr03009
]
AGROH133_04341
Enzymes [BR:
agr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AGROH133_04341
Ribosome biogenesis [BR:
agr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AGROH133_04341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRAM
Cons_hypoth95
Methyltransf_31
Methyltransf_25
Methyltransf_15
UPF0020
TRM5-TYW2_MTfase
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
ADY63664
LinkDB
All DBs
Position
circular:complement(693296..694546)
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AA seq
416 aa
AA seq
DB search
MSTQTVSIKSLGAQGDGIAHCPDGPVYVPFALPGETVAIAKVKDTGTIISIAEASTDRRE
PVCRHFGPEGVNGTCGGCSLQHFADQPYHAFKRELVVSALRSKGLTPPVDDLVICRPGER
RRAVFAARKTEKGLLLGFSQANSHHIVAIEECPVTSPGIVARLDAVRAIGLSLASNAEPF
RMTVLETLSGLDISVEGIKSVGDKQRRTLTETVLAMRGIARVALSGEILIEPQKPIIEFG
GIPVSPPAGGFTQATKQAEDAMAELVLAHVGKSKRIADLFCGSGTFALRLARVGRVHAVE
AEDKPLKALDFAARNTQGLKPVSIEKRDLFRRPLMTSEMKNYDAVVFDPPRAGAEVQCRE
LARSAVKKIVAVSCNPLTLARDLAILVEGGYRVTRVTPVDQFLWSPHVEAVATLEK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcagaccgtcagcatcaagagccttggcgcccagggcgacggcattgcgcac
tgtcccgacggcccggtctatgtgcccttcgccctgcccggcgaaacggtggcgatcgcc
aaggtcaaggataccggcaccatcatctcgattgcggaagcctccacggatcgccgcgaa
cccgtgtgccgccacttcggccccgagggcgttaacggcacctgcggcggctgttcgctg
cagcattttgccgaccagccctaccacgccttcaagcgggagctggtggtttcggcgctg
agatcgaaaggcctgacgccgccagtagacgatctcgtcatctgtcgccccggcgagcgc
cgccgcgcggtgtttgccgcccgcaagacggaaaagggcctgctgctcggcttcagccag
gcaaacagccatcacatcgtcgccatcgaggaatgtcccgtcacctcgcccggtatcgtc
gcgcggctggacgccgtgcgcgcaatcggcctttcccttgcgtcgaatgccgaaccgttc
cgcatgaccgttcttgaaacgctttcgggcctcgacatttccgtcgaaggcatcaaatcc
gtcggcgacaaacagcggcgcacattgacggaaacggtgctggccatgcgtggcatcgcc
cgtgtcgcgctatcaggcgaaatcctgatcgaaccgcaaaagccgatcatcgaattcggc
ggcattccggtttccccaccggccggcggtttcacgcaggcaaccaaacaggccgaagac
gccatggcggaactggtgcttgcccatgttggcaaatccaaacgcatcgccgatctcttc
tgcggttccggcacgtttgcgctgcggcttgcgcgcgtcggccgcgtgcatgcggttgag
gcagaggacaagccgctgaaagcgctcgatttcgccgcgcgcaacacgcagggcctgaaa
cccgtcagcatcgaaaagcgtgatcttttccgccggccgttgatgacgagcgaaatgaag
aattacgatgccgtggtgttcgatccgccgcgcgccggtgcggaagtccagtgcagggaa
cttgcgcgcagcgcggtgaagaaaatcgtagccgtcagctgcaatccgctgacgcttgcg
cgcgacctcgccattctggtggagggcggctatcgcgtcacgcgcgtcacgccggtcgac
cagttcttgtggtcgccgcatgtggaagcggtggcgacgctggagaaataa
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