Agrobacterium tumefaciens H13-3: AGROH133_05018
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Entry
AGROH133_05018 CDS
T01432
Symbol
rnpO
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGROH133_05018 (rnpO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agr03021
]
AGROH133_05018 (rnpO)
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_05018 (rnpO)
Enzymes [BR:
agr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGROH133_05018 (rnpO)
Transcription machinery [BR:
agr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AGROH133_05018 (rnpO)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AGROH133_05018 (rnpO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
ADY63952
LinkDB
All DBs
Position
circular:971421..971813
Genome browser
AA seq
130 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLASHRARQISQGSSITVDRDNDKNPVVALREIADEMLSP
DDLKEDLIHSLQKHVEVDEPEPDPVTLAASATADGEEDDQPETVTFDQMSEEELLAGIEG
LVPPEKNDDY
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcacagttgaagattgcattgataaagtagacaaccgtttcgagctggtc
cttctcgccagccaccgtgcgcgccagatttcccaaggctcgtccatcacggttgaccgc
gataacgacaagaacccggtcgtcgctctgcgcgaaatcgccgacgagatgctctcgccc
gacgacctcaaggaagacctcatccattcgctgcagaagcatgtggaagtggacgagccc
gagcccgatccggttacgctggcagcctccgctactgccgatggcgaagaggacgaccag
ccggaaaccgttactttcgaccagatgtcggaagaagaactgctggccggtatcgaaggc
cttgtgccgccggaaaaaaatgacgactattga
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