Agrobacterium tumefaciens H13-3: AGROH133_05162
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Entry
AGROH133_05162 CDS
T01432
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_05162 (radA)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AGROH133_05162 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_16
ChlI
RecA
DnaB_C
AAA_30
Lon_C
AAA
SLFN-g3_helicase
AAA_22
nSTAND3
AAA_24
AAA_5
NTPase_1
ATPase_2
MeaB
NACHT
AAA_14
KdpD
IstB_IS21
GvpD_P-loop
Elong_Iki1
HepII_C
MCM
CbiA
Hpr_kinase_C
AAA_19
DUF7125
ArsA_ATPase
AAA_28
ABC_tran
NPHP3_N
DEAD
AAA_33
ATP-synt_ab
Fer4_NifH
DAP3
AAA_29
DUF815
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADY64001
LinkDB
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Position
circular:complement(1019204..1020604)
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AA seq
466 aa
AA seq
DB search
MAKAKTQFVCQNCGTVHTRWAGKCEGCGEWNTIVEEDPMGGIGSGPGKTPKKGRAVALTA
LSGEIEEAPRIPTGISELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQAAAALSRRGHRV
IYVSGEEAVAQVRLRAQRLGAAETDVLLAAETNVEDILATISEGKRPDLVIIDSIQTLWS
DTADSAPGTVTQVRTGVQAMIRYAKQTGATMVLVGHVTKEGQIAGPRVVEHMVDAVLYFE
GDRGHHYRILRTVKNRFGPTDEIGVFEMSDRGLREVSNPSELFLGERNEKSPGAAVFAGM
EGTRPILVEVQALVAATSLGTPRRAVVGWDSSRLAMILAVLEAHCGVKLGQHDVYLNVAG
GYRISEPAADMAIASALVSSLAGLALPADCVYFGEISLSGAVRPVSHTGQRLKEAEKLGF
SAALLPSASAELPKAGKGRWTEIESLPDLVARIAGSGNRFKQVEDD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccaagacccaattcgtgtgccagaactgcggcacggttcatacccgctgg
gcgggaaaatgcgaaggctgcggcgaatggaataccatcgtcgaagaagacccgatgggc
ggtatcggctccggccccggcaagacgccgaaaaaaggccgggcggtcgcgcttacggcg
ctttcgggcgagatcgaggaggcgccgcgcattccgaccggcatcagcgaactggaccgg
gcaaccggtggcggtttcgtgcgcggttcggcggtgttgatcggcggcgatcccggcatc
ggcaaatcgaccctgctgatgcaggcggcagctgccctttcgcggcgcggacatcgcgtc
atctatgtttctggcgaagaagcggtagcgcaggtgcgtctgcgcgcccagcggctgggt
gcggcggaaaccgacgtgctgctggcggcagaaaccaatgtcgaggatattctggcgacg
atttccgagggcaaacgccccgatctcgtcatcatcgattccatccagacgctatggagt
gacacagccgattccgctcccggcacggtgacgcaggtgcgcaccggcgtgcaggcaatg
atccgttacgcaaagcagacgggcgcgaccatggtgctggtgggccatgtgaccaaggaa
ggccagatcgccggtccccgcgtggtggagcacatggtcgacgccgtgctttatttcgaa
ggcgaccgcggccaccattaccgcattctgcgcaccgtcaagaaccgcttcgggcctacg
gacgagatcggcgtatttgaaatgtccgatcgcggattgcgcgaggtctccaacccgtcc
gaactgttccttggcgagcgcaacgagaaatctcccggtgccgcggtctttgccggcatg
gagggcacccgtcccattctggtcgaggtgcaggcgctggtcgcggccacctcgctcggc
acgccgcgccgcgccgtggtcggctgggacagttcgcggctcgccatgatccttgccgtg
ctggaagcccattgcggcgtgaagctcggtcagcacgacgtttatctgaacgtcgccggc
ggataccgcatttccgaaccggctgcggatatggcgatagcttctgcgctggtttcctcg
cttgccggtcttgccctgcccgccgattgcgtctatttcggcgagatcagcctgtcgggc
gcggtacggccagtttcgcatacgggccagcgtttgaaagaagctgaaaaactcggtttc
tccgccgcacttctgccgtctgcttcggctgaattgccgaaagcgggcaaggggcgctgg
acggaaatagaaagcctgccggacctcgtggcgcgcatcgccggttccggcaaccggttc
aaacaggttgaggacgactaa
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