Agrobacterium tumefaciens H13-3: AGROH133_05327
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Entry
AGROH133_05327 CDS
T01432
Symbol
aspS
Name
(GenBank) Aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AGROH133_05327 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
agr01007
]
AGROH133_05327 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agr03016
]
AGROH133_05327 (aspS)
03029 Mitochondrial biogenesis [BR:
agr03029
]
AGROH133_05327 (aspS)
Enzymes [BR:
agr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
AGROH133_05327 (aspS)
Amino acid related enzymes [BR:
agr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AGROH133_05327 (aspS)
Transfer RNA biogenesis [BR:
agr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AGROH133_05327 (aspS)
Prokaryotic type
Other AARSs
AGROH133_05327 (aspS)
Mitochondrial biogenesis [BR:
agr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AGROH133_05327 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ADY64072
LinkDB
All DBs
Position
circular:1093367..1095250
Genome browser
AA seq
627 aa
AA seq
DB search
MLCLDKSGWSCAFPANFDSAAHLAHDTLQDIKMHRYRSHTCAALRKSDVGETVRLSGWVH
RVRDHGGVLFIDLRDHYGITQVVADPDSPAFKVAETVRGEWVIRIDGLVKARSEDTINKG
MATGEIELYAQEIEVLGVAKELPLPVFGEPEYPEDVRLKYRFLDLRRETLHKNIVKRTQI
ISSMRKGMGDLGFAEYTTPILTASSPEGARDFLVPSRIHEGQFFALPQAPQQYKQLLMVA
GFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFVTQEDVWTTMEPMMTAVFEQFAEGK
PVTKEWPRIPYDESIRKYGSDKPDLRNPIVMEAVTEHFDGSGFKVFANMIASNPKVQVWA
IPAKTGGSRAFCDRMNAWAQSQGQPGLGYIFWKEEEGKVAGSGPLAKNIGEERTEALRQQ
LGLEAGDACFFVAGDPAKFYKFAGEARTRAADELNLIDRDRFEMCWIVDFPFFEYNDEEK
KIDFAHNPFSMPQGGMEALEGQDPLSIKAFQYDAVCNGFEIASGSIRNQSPELMVKAFEK
VGLSQSDVEERFGGLYRAFQYGAPPHGGCAFGIDRVVMLLVGAKNLREITLFPMNQQAQD
LLMNAPSPATPTQLRELALRVVPSKKD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
gtgctttgccttgacaaatcgggctggtcatgcgcttttccggcaaatttcgacagtgcc
gcccatctggcccacgacacgctccaggatattaaaatgcatcgttaccgcagccacacc
tgtgccgctctccgcaagtccgacgtcggcgaaaccgttcgcctttccggttgggttcat
cgcgtgcgagatcatggcggcgttctcttcatcgaccttcgcgaccactacggcattacc
caggtcgtggccgatcccgatagcccggccttcaaggttgcggaaaccgtgcgcggtgaa
tgggtgatccgcattgacggtctcgtcaaggcgcggtccgaagacaccatcaacaagggc
atggccactggcgagatcgagctttatgcgcaggagatcgaggttctgggcgttgccaag
gaactgccgctgccggtcttcggtgagcctgaatatcccgaagatgttcgcctgaagtat
cgcttcctcgacctgcgccgcgaaaccctgcacaagaacatcgtcaagcgcacgcagatc
atctcctccatgcgcaagggtatgggcgatctgggctttgccgaatatacgacgccgatc
ctcaccgcatcctcgccggaaggcgcgcgcgacttcctcgttccctcgcgcatccacgaa
ggccagttcttcgcgctgccgcaggcccctcagcagtacaagcagcttctgatggtggct
ggtttcgaccgctacttccagatcgctccatgcttccgcgatgaagacccgcgtgcagac
cgtctgccgggcgaattctaccagctcgacgtcgaaatgagcttcgtgacccaggaagac
gtctggaccacgatggagccgatgatgacggccgttttcgaacagtttgccgaaggcaag
ccggtgacgaaagaatggccgcgcattccctatgacgaatcgatccgtaaatacggctcc
gacaagccggacctgcgcaacccgattgtcatggaagccgtgaccgaacatttcgatggc
tcgggcttcaaggttttcgccaacatgatcgcctccaaccccaaggtgcaggtctgggct
attccggccaagaccggtggttcgcgtgcattctgcgatcgcatgaacgcctgggcgcag
agccagggccagccgggcctcggctacatcttctggaaggaagaagaaggcaaggttgcc
ggctccggtccgcttgccaagaacatcggcgaggaacgcaccgaggcgctgcgccagcag
cttggccttgaggcgggcgacgcctgcttcttcgtcgcgggcgatcccgccaagttctac
aagtttgccggcgaggcgcgcacccgtgccgccgacgagctgaacctgattgaccgcgac
cgtttcgaaatgtgctggatcgtcgatttccccttcttcgaatataacgacgaagaaaag
aagatcgatttcgcccacaaccccttctccatgccgcagggtggcatggaagcgctggaa
ggacaggatccgctctccatcaaggctttccagtatgacgcggtctgcaacggcttcgaa
atcgcctccggctctatccgtaaccagtcgcccgagctgatggtcaaggctttcgaaaag
gtcggcctgtcgcagagcgacgtggaagagcgcttcggcggtctctaccgcgccttccag
tacggtgcgcctccgcacggcggttgcgccttcggtatcgaccgtgtggtcatgcttctg
gttggtgcgaagaacctgcgcgaaatcacgctgttcccgatgaaccagcaggcacaggac
ctgctgatgaacgcgccgtcgccggcaacgccgacccagcttcgcgagctggcgctgcgc
gtggttccgtccaagaaggactga
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