Agrobacterium tumefaciens H13-3: AGROH133_05478
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Entry
AGROH133_05478 CDS
T01432
Symbol
cpdB
Name
(GenBank) bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00230
Purine metabolism
agr00240
Pyrimidine metabolism
agr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
AGROH133_05478 (cpdB)
00240 Pyrimidine metabolism
AGROH133_05478 (cpdB)
Enzymes [BR:
agr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
AGROH133_05478 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
AGROH133_05478 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
ADY64117
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All DBs
Position
circular:complement(1142433..1144421)
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AA seq
662 aa
AA seq
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MSSLLALHPITRRSLLGGIAASSALVLLHPFAARAAANQAHLRIMETTDIHVHVFPYDYY
ADKPNDTMGLARTASIIGAIRAEAGNSMLVDNGDFLQGNPLGDYIAYERGMKAGDKHPVI
NAMNVLGYDCGTLGNHEFNYGLDYMSNTLAGAGFPYVCANLTKGQLASDPKQDELFFKPY
VILEKQIRDGAGVTSPVKVGIIGFVPPQIMMWDSKNLEGKAQTRDIVEAAKAWVPVMKEE
GADIVIALSHSGIDGKGQTDRMENASLYLAGVEGIDAIFTGHQHLVFPGPKTWDGIEGAD
AIKGTLMGKPAVMAGFWGSHMGLIDLLLEKDGKSWKIVDFTSEARPIYHRDDNRKVVADV
TDKPEVIAAAKADHEAALAYVRRPVGKTSAPLYSYFALVADDPSVQIVSNAQTWYIKDML
KEGQYKDLPVLSAAAPFKSGGRGGADYYTDVPAGDIAIKNVADLYLYPNTVQAVLINGAQ
VKNWLEMSAGMFNTVEAGAKDAPLLNADFPSYNFDVIDGVTYQIDISKPAKFDKDGKAVN
PDSNRIVNLQFDGKPIDPEQKFVVATNNYRASGGGKFPDIAADKVIFVAPDTNRDVIVRY
IIDQGTINPSADANWSFAPVANTTAIFETGPKGRNYAADIKGAKIEDAGDGAEGFAKFRL
VL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcttctcgctctccaccccatcactcgccgttcgcttctgggtggcatcgcc
gcctcttcggctctggtgctgttgcatcccttcgccgcgcgcgccgcagccaaccaggcg
catctgcgcatcatggaaacgactgacatccacgttcacgtttttccctatgattattac
gccgacaaaccgaacgacacgatgggtctggcgcgcaccgcttcgatcatcggcgccatc
cgtgccgaggccggaaactcgatgctggtggataatggcgacttcctgcagggcaatccg
ctcggcgactacatagcctatgagcgcggcatgaaggccggcgacaagcatcccgtcatc
aacgccatgaatgtccttggctatgattgtggcacgcttggcaaccacgaattcaattac
ggcctcgactatatgtccaatacgctggcgggcgccggtttcccttatgtctgcgccaac
ctcaccaagggtcagctggcttccgatcccaagcaggatgagctgttcttcaagccttac
gtcatcctcgagaaacagatccgcgatggtgcaggcgtaaccagcccggtcaaggtcggt
ataatcggtttcgtgccgccgcagatcatgatgtgggattccaagaatctggagggcaag
gcccagacgcgcgatatcgtcgaggcggctaaagcctgggttccggtcatgaaggaagaa
ggtgccgatatcgtcatcgccctttcccattccggcatcgatggcaagggccagaccgat
cgcatggaaaacgcctcgctttatctggcgggcgtggaaggtattgacgccatcttcact
ggtcaccagcatctggtcttccccggtccaaagacatgggacggcatcgagggtgcggat
gcgatcaagggtacgctgatgggcaagccggccgtgatggccggtttctggggctcgcat
atgggcctcattgaccttcttctcgaaaaggacggcaaaagctggaagatcgtcgatttc
acctccgaggcccggccgatctaccaccgcgacgacaatcgcaaggtcgttgcagatgtc
acggacaaaccggaggtcatagccgccgccaaggcagatcacgaagcggcgctcgcctat
gtgcgtcgcccggtcggcaagacgtcggcgccactctattcctacttcgcgctggtggcc
gacgacccgtccgtgcagatcgtctctaatgcccagacgtggtacatcaaggacatgctg
aaggaagggcaatataaggatctgcccgtgctttcggcagcagcgccattcaagtctggc
ggtcgcggtggtgcggattattacaccgatgtccctgccggtgacatcgccatcaagaac
gtcgccgatctctacctctaccccaacacggtgcaggcggtgctgatcaacggtgcgcag
gtgaagaactggctggaaatgtccgccggcatgttcaacacggtcgaggccggcgcaaag
gatgcgccgctcctaaacgcggattttccgtcctataatttcgacgtcatcgacggtgtc
acctaccagatcgacatttccaaaccggcaaagttcgacaaggacggcaaggccgtcaat
cccgacagcaaccgcatcgtcaatctgcaattcgatggcaagccgatcgaccccgagcag
aaattcgtggtggcaaccaacaattaccgtgcaagcggcggcggaaaattccccgatatc
gccgccgacaaggtgatcttcgtggcgcccgacaccaaccgcgacgtgatcgtgcgctat
atcatcgatcagggcaccattaacccgtcggcggatgccaactggtcattcgccccagtt
gccaatacgaccgccatcttcgagactggcccgaaaggtcgcaattacgcggctgacatc
aagggcgcaaaaatcgaggatgccggcgacggcgccgaaggtttcgcaaagttccgcctc
gttctctag
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