Agrobacterium tumefaciens H13-3: AGROH133_05921
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Entry
AGROH133_05921 CDS
T01432
Symbol
pdhB
Name
(GenBank) pyruvate dehydrogenase E1 component beta subunit
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00010
Glycolysis / Gluconeogenesis
agr00020
Citrate cycle (TCA cycle)
agr00620
Pyruvate metabolism
agr00785
Lipoic acid metabolism
agr01100
Metabolic pathways
agr01110
Biosynthesis of secondary metabolites
agr01120
Microbial metabolism in diverse environments
agr01200
Carbon metabolism
agr01210
2-Oxocarboxylic acid metabolism
Module
agr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AGROH133_05921 (pdhB)
00020 Citrate cycle (TCA cycle)
AGROH133_05921 (pdhB)
00620 Pyruvate metabolism
AGROH133_05921 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AGROH133_05921 (pdhB)
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
AGROH133_05921 (pdhB)
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Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
QRPTase_N
DUF1246
Motif
Other DBs
NCBI-ProteinID:
ADY64305
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Position
circular:1331409..1332830
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AA seq
473 aa
AA seq
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MPVEILMPALSPTMEEGTLSKWLKKEGDKVTSGDVIAEIETDKATMEVEAVDEGVIGKLL
IDAGTEGVKVNTPIAVLIQEGESAADISSSAKKEEPKAEAANSDSDAAGGKTREASEEPS
AAKEAAKVPAAPKIEVAADPDIPEGTEMVMTTVREALRDAMAEEMRADEKVFVMGEEVAE
YQGAYKITQGLLQEFGERRVIDTPITEHGFAGIGVGAAMTGLRPIVEFMTFNFAMQAIDQ
IVNSAAKTLYMSGGQMGAPMVFRGPSGAAARVGAQHSQCYAAWYSHIPGLKVVMPYTAAD
AKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPIGKARIHRKGKDATIVSFGIG
MTYAIKAVAELEKLGIDVELIDLRTIRPMDLPTVIESVKKTGRLVTVEEGFPQSSVGDFI
ANQVMRAAFDYLDAPILTIAGKDVPMPYAANLEKLALPNVDEVVQAVKTVCYK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaattcttatgcccgccctttccccgaccatggaggaaggcacgctttcc
aaatggcttaaaaaggaaggcgacaaggtcacatccggcgacgtgattgccgagatcgag
accgacaaggcgaccatggaagtggaagctgtggatgaaggtgttatcggcaagctgctg
atcgacgccggcaccgaaggcgtcaaggtcaacacgccgatcgccgttctcatccaggaa
ggcgaaagcgctgccgacatttcttcttccgccaagaaggaagagccgaaggctgaagct
gcaaattccgattcggatgccgcaggcggcaagacccgcgaagcatccgaggagccgagc
gctgccaaggaagcggcaaaggttccggcagcacctaagatcgaagtcgctgccgatccg
gatattcctgaaggcaccgaaatggtgatgacgacggtgcgtgaagcgctgcgcgacgcc
atggccgaagaaatgcgcgccgacgaaaaagtcttcgtcatgggtgaggaagtcgccgaa
tatcagggcgcttacaagattacccaaggcctgttgcaggaattcggcgaacgccgcgtt
atcgacaccccgatcaccgagcacggttttgccggtatcggcgtcggtgcggcaatgacg
ggcctgcggcccatcgtcgaattcatgaccttcaacttcgccatgcaggcgatcgaccag
atcgtcaactcggcggcgaagacgctttacatgtcgggcggccagatgggtgcgccgatg
gtgttccgtggcccctcgggtgctgctgcccgcgttggcgctcagcattcgcaatgttac
gccgcatggtacagccatattccgggcctcaaggtcgtcatgccctacacggcagcggac
gccaagggtctcctgaaggcagccatccgtgacccgaacccggtcatcttccttgagaac
gaaattctctacggccagagcttcgaagtgccgaagctcgacgatttcgtgctgccgatc
ggcaaggcgcgcattcaccgcaagggcaaggatgcgacgatcgtttccttcggcatcggc
atgacctacgcaatcaaggctgttgcggaactcgaaaagctcggcatcgacgtcgaactg
atcgaccttcgcaccatccgtccgatggatctgcctaccgtcatcgaatcggtcaagaag
accggtcgtctggtcaccgtcgaggaaggcttcccgcagtcatcggttggtgacttcatc
gccaatcaggtcatgcgtgccgctttcgactatctcgatgcgccgatcctgacgattgcc
ggcaaagacgttccgatgccttacgcggcaaacctcgaaaagctggctttgccgaacgtc
gatgaagtcgttcaggctgtcaaaaccgtctgctacaagtaa
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