Agrobacterium tumefaciens H13-3: AGROH133_05985
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Entry
AGROH133_05985 CDS
T01432
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00260
Glycine, serine and threonine metabolism
agr00630
Glyoxylate and dicarboxylate metabolism
agr00670
One carbon pool by folate
agr00785
Lipoic acid metabolism
agr01100
Metabolic pathways
agr01110
Biosynthesis of secondary metabolites
agr01200
Carbon metabolism
Module
agr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AGROH133_05985 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AGROH133_05985 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AGROH133_05985 (gcvP)
00670 One carbon pool by folate
AGROH133_05985 (gcvP)
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AGROH133_05985 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ADY64336
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Position
circular:complement(1363840..1366704)
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AA seq
954 aa
AA seq
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MTTPTEFHFTDYQPYDFANRRHIGPSPSEMAEMLKVIGYKSLDALIDATVPSSIRQKVPL
TWGAALTEREALDRLRETANKNQVLTSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMCQRVAKSKATAFFVDA
NCHPQTIALIETRAAPLGWKVIVGNPFTDLDPVDVFGAIFQYPGTHGHVSDFSGLISRLH
QTGAIAAVAADLLALTLLKSPGEMGADIAIGTSQRFGVPVGYGGPHAAYMSVKDAHKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYGVFHGPQGI
KAIAQQTHQKAVLMAKGLEKLGYVIEPETFFDTITVEVGHMQGVILRSAVAEGVNLRKVG
ATKIGMSLDERTRPATLEAVWRAFGGNFSISDFELEYRLPKELLRTSQYMTHPIFHMNRA
ESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPANQALG
YKEMIDDLSEKLCSVTGYDAFSMQPNSGAQGEYAGLLTIRNYHIANGGAHRDVCLIPTSA
HGTNPASAQMVGMKVVPVKVRENGDIDIDDFRAKAEQYAQNLSCCMITYPSTHGVFEETV
REICEITHKHGGQVYLDGANMNAMVGLARPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPYLPGHPTTDGREGAVSAAPFGSPSILPISWSYCLMMGGEGLTQATKVAILNA
NYIAERLKGAYDVLYKSETGRVAHECIIDTRPLADSCGVTVDDVAKRLVDCGFHAPTMSW
PVAGTLMIEPTESETKAEIDRFCDAMLAIREEARDIEEGRADKTNNPLKNAPHTVEDLVG
EWDRPYSREQGCFPPGAFRIDKYWSPVNRIDNVYGDRNLICTCPPMEAYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcccacggaattccatttcaccgactatcagccctatgatttcgccaaccgg
cgtcatatcgggccgtcgccgtcggaaatggcggagatgctgaaggtcatcggctacaag
agcctcgatgccctgatcgacgccaccgttccctcgtccatccgccagaaggtgccgctg
acctggggtgcagcgctgaccgaacgcgaggcgctcgaccgcctgcgcgagacggccaac
aagaaccaggtgctgacctcgctgatcggccagggctattacggtacaatcaccccgccc
gtgatccagcgcaacattctggaaaaccctgcctggtacaccgcctatacgccttaccag
ccagaaatcagccagggccgtcttgaggcgctgctgaactaccagacgatggtctgcgat
ctgaccggcctcgatgtcgccaacgcatcgctgctcgatgaagcgactgccgctgccgaa
gccatggcgatgtgccagcgcgtcgcgaagtccaaggcgactgccttcttcgtcgatgcc
aattgccatccgcagaccatcgcgctgatcgagacacgcgcggcgccactcggctggaag
gtgatcgttggtaatccctttaccgatcttgatcctgtcgacgtgttcggcgcgatcttc
cagtatccgggcacccacggtcatgtcagcgatttctcgggcctgatttcccgcctgcac
cagacgggtgccatcgctgccgttgccgccgatcttctggcgctgacgctgttgaagtca
cccggtgaaatgggtgcggatatcgctatcggcacctcgcagcgtttcggcgttccggtc
ggctatggtggtccgcatgcggcttacatgtccgtcaaggatgcacataagcgctccatg
cctggccgtctggttggcgtctcagtcgatgcgcgcggcaatcgcgcctatcgtctgtcg
ctgcagacccgcgagcagcatatccgccgcgagaaggctacctccaacatctgcaccgcg
caggtgctgcttgcagtcatggcgtcgatgtatggcgtcttccatggcccgcagggcatc
aaggcgattgcccagcagacccaccagaaggccgttttgatggccaagggcctggagaag
cttggctacgtcatcgagccggaaaccttcttcgacaccatcaccgtcgaagtcggccat
atgcagggcgtcatcctgcgctcggccgttgcggaaggtgtgaacctgcgcaaggtcggc
gcgaccaagatcggcatgagccttgacgagcgcacgcgtcccgcgacgcttgaggcggtc
tggcgcgcattcggcggcaatttctcgatctcggatttcgagttggaatatcgcctgccg
aaggaactgctgcgcaccagccagtacatgacgcatccgatcttccacatgaaccgtgcc
gaaagcgagatgacccgttacatccgccgtctttcggaccgtgatctcgcgctcgaccgc
tcgatgatcccgctcggttcctgcaccatgaaactgaacgcaactgcggaaatgctgccc
atcacgtggccggaattttccgacatccatcccttcgtgccagccaatcaggcgctcggc
tacaaggagatgatcgatgacctctcggaaaagctgtgctctgtcaccggttacgacgcc
ttctccatgcagccgaattccggcgcgcaaggggaatatgcggggctcctgaccatccgc
aactaccacatcgccaatggcggcgcacatcgcgacgtttgcctcattccaacctcggcg
catggcaccaatccagcctccgcgcagatggtcggcatgaaagtggtgccggtgaaagtg
cgggaaaacggcgatattgatatcgacgatttccgagcaaaagcagagcagtatgcgcaa
aacctctcgtgctgcatgatcacctatccgtccacccatggcgtgtttgaggagacggtt
cgcgagatttgcgagatcacccataaacacggtggtcaggtctatctcgacggcgccaac
atgaacgccatggtcggtcttgcccgtcccggcgatatcggttccgacgtcagccacctc
aacctgcacaagaccttctgcatcccgcatggcggcggcggtccgggcatggggccgatc
ggcgtcaaggcgcatcttgctccctatcttcccggtcatccgacgacggacggtcgtgaa
ggtgcggtttcggctgcccccttcggctcgccgtcgatcctgccgatttcctggagctac
tgcctgatgatgggcggcgaagggctgacgcaggcgaccaaggttgcgatcctcaacgcc
aactacatcgccgaacggctgaagggcgcttacgacgtgctctacaagtccgaaacggga
cgagtggcgcatgagtgcatcatcgacacccgaccgctggcagacagctgcggcgtgacg
gtggacgacgttgcaaagcgtctcgtcgactgcggtttccatgcgccgaccatgagctgg
ccggttgccggcacgctgatgatcgagccgacggagtccgagaccaaggcggaaatcgac
cgtttctgcgatgccatgctggcgatccgcgaggaagcccgcgacatcgaggaaggccgt
gcggacaagaccaacaatccgctgaagaacgcgccgcacacggtagaagatctcgtcggc
gagtgggatcgtccctacagccgcgaacagggttgcttcccgcccggcgccttccgcatt
gacaaatactggtcgccggtaaaccgcattgacaatgtctatggcgaccgcaacctcatc
tgcacctgcccgccgatggaggcttatgccgaggccgccgaataa
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